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  1. Field Of View
  2. FilterByMol
  3. FindObjectsNearby
  4. FindSurfaceResidues
  5. Find buried waters
  6. Find pairs
  7. Find symbol
  8. Findseq
  9. Fit
  10. Flag
  11. Flatten obj
  12. Fnab
  13. FocalBlur
  14. Focus alignment
  15. Fog
  16. Fog start
  17. Fork
  18. Forster distance calculator
  19. Forward
  20. Fragment
  21. Frame
  22. Frame slider
  23. Full Screen
  24. Full screen
  25. Fuse
  26. GLSL Shaders
  27. GROMACS Plugin
  28. Gallery
  29. Geo Measures Plugin
  30. Geometry export mode
  31. Get
  32. GetNamesInSel
  33. GetRotationMatrix
  34. Get Angle
  35. Get Color Indices
  36. Get Coordinates I
  37. Get Coordinates II
  38. Get Dihedral
  39. Get Distance
  40. Get Extent
  41. Get Frame
  42. Get Model
  43. Get Names
  44. Get Pdbstr
  45. Get Position
  46. Get State
  47. Get Symmetry
  48. Get Title
  49. Get Type
  50. Get Version
  51. Get View
  52. Get chains
  53. Get color index
  54. Get color tuple
  55. Get colors
  56. Get coords
  57. Get coordset
  58. Get fastastr
  59. Get legal name
  60. Get names of type
  61. Get object list
  62. Get object matrix
  63. Get raw alignment
  64. Get raw distances
  65. Get sasa relative
  66. Get session
  67. Get type
  68. Get unused name
  69. Git admin
  70. Git authors
  71. Git include
  72. Git install scripts
  73. Git intro
  74. Git script guidelines
  75. GoogleSearch
  76. Gradient
  77. Grepsel
  78. Grepset
  79. Grid max
  80. Grid mode
  81. Grid slot
  82. Group
  83. Gyration tensor
  84. H Add
  85. H Fill
  86. Half bonds
  87. Hash max
  88. Hbplus
  89. Helicity check
  90. Hide
  91. Hide underscore names
  92. HighlightAlignedSS
  93. Homology Modeling
  94. Huge surfaces
  95. Id Atom
  96. Ideas
  97. Identify
  98. Ignore case
  99. Ignore case chain
  100. ImmersiveViz
  101. Inchoates pymolrc
  102. Index
  103. Indicate
  104. Inertia tensor
  105. InterfaceResidues
  106. Internal Gui
  107. Internal feedback
  108. Internal gui
  109. Internal gui control size
  110. Internal gui mode
  111. Internal gui width
  112. Internal prompt
  113. Intra fit
  114. Intra rms
  115. Intra rms cur
  116. Intra xfit
  117. Invert
  118. Isodot
  119. Isolevel
  120. Isomesh
  121. Isoslider
  122. Isosurface
  123. Iterate
  124. Iterate sses
  125. Join states
  126. Jump
  127. Jupyter
  128. Kabsch
  129. Key Wait
  130. Keyboard Shortcut Menu
  131. Label
  132. Label anchor
  133. Label angle digits
  134. Label color
  135. Label dihedral digits
  136. Label distance digits
  137. Label font id
  138. Label outline color
  139. Label position
  140. Label shadow mode
  141. Label size
  142. LatticeGenerator
  143. Launching From a Script
  144. Launching PyMOL
  145. Leap Motion
  146. LigAlign
  147. Light
  148. Light count
  149. Line color
  150. Line smooth
  151. Line width
  152. Lines
  153. Linux Install
  154. Lisica
  155. ListSelection2
  156. List Colors
  157. List Secondary Structures
  158. List Selection
  159. Load
  160. LoadDir
  161. Load Model
  162. Load Traj
  163. Load aln
  164. Load brick
  165. Load coords
  166. Load img stack
  167. Load new B-factors
  168. Loadall
  169. Ls
  170. MAC Install
  171. MOLE 2.0: advanced approach for analysis of biomacromolecular channels
  172. MSMS
  173. MacOSX-specific .pymolrc file
  174. Main Page
  175. MakeVinaCommand
  176. Make Figures
  177. Making Movies
  178. Map Double
  179. Map Set Border
  180. Map Trim
  181. Map auto expand sym
  182. Map double
  183. Map new
  184. Map set
  185. Mappend
  186. Mark center
  187. Mask
  188. Matrix Copy
  189. Matrix mode
  190. Matrix reset
  191. Max ups
  192. Mclear
  193. Mcsalign
  194. Mdo
  195. Mdump
  196. Measure Distance
  197. Mem
  198. Mesh
  199. Mesh color
  200. Mesh lighting
  201. Mesh mode
  202. Mesh negative visible
  203. Mesh quality
  204. Mesh type
  205. Mesh width
  206. Meter Reset
  207. Middle
  208. Min mesh spacing
  209. Minimize ob
  210. Mmatrix
  211. Mobile
  212. Model Space and Camera Space
  213. Modeling and Editing Structures
  214. Modevectors
  215. Mole
  216. Molecular Sculpting
  217. Monitor file continuously
  218. Monitors Hardware Options
  219. Morph
  220. Morpheasy
  221. Morpheasy linear
  222. Motif
  223. Mouse Controls
  224. Mouse Settings
  225. Mouse modes
  226. Move
  227. Movie.produce
  228. Movie.roll
  229. MovieSchool
  230. MovieSchool 1
  231. MovieSchool 2
  232. MovieSchool 3
  233. MovieSchool 4
  234. MovieSchool 5
  235. MovieSchool 6
  236. Movie color fade
  237. Movie fade
  238. Movie fps
  239. Movie from scenes
  240. Movie loop
  241. Movie panel
  242. Movie pdf
  243. Movit
  244. Mplay
  245. Mpng
  246. Mset
  247. Msms surface
  248. Mstop
  249. MtsslDock
  250. MtsslPlotter
  251. MtsslTrilaterate
  252. MtsslWizard
  253. Multifilesave
  254. Multisave
  255. Mutagenesis
  256. Mview
  257. Named Atom Selections
  258. Nb spheres
  259. Nmr cnstr
  260. Nonstandard Amino Acids
  261. Normalize ccp4 maps
  262. NsSNP Loader
  263. Nuccyl
  264. Nucleic Acid Sequence
  265. O
  266. OLD TOPTOC
  267. ObjectByArrows
  268. ObjectFocus
  269. Object Matrix
  270. Objects and Selections
  271. Older News
  272. Opaque background
  273. Optimize
  274. Order
  275. Orient
  276. Origin
  277. Orthoscopic
  278. Outline
  279. Overview of nucleic acid cartoons
  280. PDB Index Search
  281. PDB Loader Service
  282. PDB Web Services Script
  283. PDB plugin
  284. PDIviz
  285. PDIviz plugin
  286. PICv
  287. PLoS
  288. PYMOL PATH
  289. Pair fit
  290. Pairwise distances
  291. Palette Colorbars
  292. Pdb Conect All
  293. Pdb conect all
  294. Pdb conect nodup
  295. Pdb echo tags
  296. Pdb reformat names mode
  297. Pdb retain ids
  298. Pdb use ter records
  299. Pdbsurvey
  300. Peptide Sequence
  301. Perp maker
  302. Pickable
  303. Plane Wizard
  304. Plot noe
  305. PluginArchitecture
  306. Plugin Manager
  307. Plugindirectory
  308. Plugins
  309. Plugins Tutorial
  310. Pml2py
  311. Pmlbeta
  312. Png
  313. PocketPicker
  314. Polarpairs
  315. PoseView
  316. PovRay
  317. Povray vs. pymol
  318. PowerMate Dial OS X
  319. Practical Pymol for Beginners
  320. Preset
  321. ProBiS H2O
  322. ProMOL
  323. Process All Files In Directory
  324. Properties Inspector
  325. Property Selectors
  326. Propka
  327. Protect
  328. Protein contact potential
  329. Proxy Config
  330. Pse binary dump
  331. Pse export version
  332. Pseudoatom
  333. Psico
  334. Publication Quality Images
  335. Pucker
  336. Push Undo
  337. Pwd
  338. PyANM
  339. PyDet
  340. PyMOLProbity
  341. PyMOLWiki:About
  342. PyMOLWiki:Administrators
  343. PyMOLWiki:Bureaucrats
  344. PyMOLWiki:Community Portal
  345. PyMOLWiki:Searching
  346. PyMOLWiki talk:Community Portal
  347. PyMOL mailing list
  348. PyMod
  349. PyShifts
  350. Pymol-script-repo
  351. Pymol.stored
  352. Pymol2glmol
  353. Pymolrc
  354. Pymolscriptrepo
  355. Python
  356. PythonTerminal
  357. Python Integration
  358. Pytms
  359. Quick dist
  360. Quickdisplays
  361. Quit
  362. RPC
  363. RUCAP UM-5
  364. Radius of gyration
  365. Ramp New
  366. Ramp update
  367. Rasmol
  368. Rasmolify
  369. Ray
  370. Ray Shadows
  371. Ray Trace Fog
  372. Ray Trace Gain
  373. Ray Tracing
  374. Ray blend blue
  375. Ray blend colors
  376. Ray blend green
  377. Ray blend red
  378. Ray direct shade
  379. Ray opaque background
  380. Ray orthoscopic
  381. Ray shadow
  382. Ray shadows
  383. Ray texture
  384. Ray texture settings
  385. Ray trace disco factor
  386. Ray trace fog
  387. Ray trace frames
  388. Ray trace gain
  389. Read Molstr
  390. Read PDB-String
  391. Read Pdbstr
  392. Rebuild
  393. Recolor
  394. Redo
  395. Reflect
  396. Refresh
  397. Reinitialize
  398. Remote Desktop
  399. Remove
  400. Remove Picked
  401. Removealt
  402. Rename
  403. Rendering plugin
  404. Renumber
  405. Replace
  406. ResDe
  407. Reset
  408. Resicolor
  409. Resicolor plugin
  410. Retain order
  411. Rewind
  412. Ribbon
  413. Ribbon Width
  414. Ribbon color
  415. Ribbon sampling
  416. Ribbon side chain helper
  417. Ribbon smooth
  418. Ribbon transparency
  419. Ribbon width
  420. Ribosome PyMOL Plugin
  421. Rigimol.morph
  422. Rms
  423. Rms cur
  424. RmsdByResidue
  425. Rock
  426. Rotamer Toggle
  427. Rotate
  428. RotationAxis
  429. Rotkit
  430. Roving byres
  431. Roving delay
  432. Roving detail
  433. Roving nb spheres
  434. Run
  435. Running Scripts
  436. S2S
  437. SURFNET
  438. San Francisco Bay Area
  439. Save
  440. Save2traj
  441. SaveGroup
  442. Save Mopac
  443. Save pdb with anisou
  444. Save sep
  445. Save settings
  446. Save traj
  447. Scene
  448. Scene buttons
  449. Script Highlighting
  450. Script Tutorial
  451. Scripting FAQs
  452. Sculpt field mask
  453. Search Pymol source
  454. Search pymol-users mailing list
  455. SelInside
  456. Select
  457. SelectClipped
  458. Select sites
  459. Selection-expressions
  460. Selection Algebra
  461. Selection Exists
  462. Selection Language Comparison
  463. Selection Macros
  464. Selection overlay
  465. Selection round points
  466. Selection visible only
  467. Selection width
  468. Seq view
  469. Seq view alignment
  470. Seq view color
  471. Seq view discrete by state
  472. Seq view fill char
  473. Seq view format
  474. Seq view gap mode
  475. Seq view label color
  476. Seq view label mode
  477. Seq view label spacing
  478. Seq view location
  479. Seq view overlay
  480. Seq view unaligned color
  481. Seq view unaligned mode
  482. Set
  483. Set Color
  484. Set Dihedral
  485. Set Geometry
  486. Set Key
  487. Set Symmetry
  488. Set Title
  489. Set View
  490. Set bond
  491. Set name
  492. Set phipsi
  493. Set raw alignment
  494. Set state order
  495. Set title
  496. Set toggle
  497. Settings
  498. Shininess
  499. Show
  500. ShowLigandWaters

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