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Did you know...

Load new B-factors

Type Python Script
Download figshare
Author(s) Pietro Gatti-Lafranconi
License CC BY 4.0

Introduction

Quick and simple script to replace B-factor values in a PDB structure.

New B-factors are provided in an external .txt file, one per line.

By default, the script will also redraw the selected molecule as cartoon putty and colour by B-factor


Usage

loadBfacts mol, [startaa, [source, [visual Y/N]]]


Required Arguments

  • mol = any object selection (within one single object though)


Optional Arguments

  • startaa = number of amino acid the first value in 'source' refers to (default=1)
  • source = name of the file containing new B-factor values (default=newBfactors.txt)
  • visual = redraws structure as cartoon_putty and displays bar with min/max values (default=Y)

Limitations

For its very nature, this script is not ..→

A Random PyMOL-generated Cover. See Covers.