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  1. 0.99beta11
  2. 2. Translucent Surfaces
  3. 2to3
  4. 3DNA
  5. 3Dstrut
  6. 3d pdf
  7. AAindex
  8. AKMT Lys pred
  9. APBS
  10. APBS Electrostatics Plugin
  11. Aa codes
  12. Abort
  13. About
  14. Advanced Coloring
  15. Advanced Scripting
  16. Alias
  17. Align
  18. All states
  19. AlphaToAll
  20. Ambient
  21. AngleBetweenHelices
  22. Angle between domains
  23. Annocryst
  24. Annotate v
  25. Annotation wizard
  26. Antialias
  27. Apbsplugin
  28. Apropos
  29. Assembly
  30. Async builds
  31. Atom name wildcard
  32. Attach
  33. AutoMultiFit
  34. Auto arg
  35. Auto show classified
  36. Auto zoom
  37. Autodock plugin
  38. Average b
  39. Axes
  40. Axpymol
  41. Azahar
  42. B2transparency
  43. Backface cull
  44. Backward
  45. Ball and Stick
  46. BbPlane
  47. Bg Color
  48. Bg gradient
  49. Bg rgb
  50. Bg rgb bottom
  51. Bg rgb top
  52. Biochemistry student intro
  53. BiologicalUnit
  54. BiologicalUnit/Quat
  55. Blender
  56. Bnitools
  57. Bond
  58. Bondpack
  59. Bounding Box
  60. Builder
  61. Button
  62. Button mode name
  63. CASTp
  64. CBC
  65. CCTBX
  66. CCTBX-fedora32
  67. CGOCylinder
  68. CGO Text
  69. CMPyMOL
  70. CMYK
  71. COLLADA
  72. Cache
  73. CalcArea
  74. Capture
  75. Cart to frac
  76. Cartoon
  77. Cartoon Helix Settings
  78. Cartoon all alt
  79. Cartoon color
  80. Cartoon cylindrical helices
  81. Cartoon discrete colors
  82. Cartoon dumbbell length
  83. Cartoon dumbbell radius
  84. Cartoon dumbbell width
  85. Cartoon fancy sheets
  86. Cartoon flat cycles
  87. Cartoon flat sheets
  88. Cartoon gap cutoff
  89. Cartoon helix radius
  90. Cartoon highlight color
  91. Cartoon nucleic acid color
  92. Cartoon nucleic acid mode
  93. Cartoon oval length
  94. Cartoon oval quality
  95. Cartoon oval width
  96. Cartoon putty radius
  97. Cartoon putty scale max
  98. Cartoon putty scale min
  99. Cartoon putty transform
  100. Cartoon rect length
  101. Cartoon rect width
  102. Cartoon ring mode
  103. Cartoon ring transparency
  104. Cartoon round helices
  105. Cartoon sampling
  106. Cartoon side chain helper
  107. Cartoon smooth loops
  108. Cartoon transparency
  109. Caver2
  110. Caver3
  111. Cavity cull
  112. Ccp4 contact
  113. Ccp4 ncont
  114. Ccp4 pisa
  115. Cd
  116. Cealign
  117. Cealign plugin
  118. Cell
  119. Center
  120. Center of mass
  121. Centerofmass
  122. Centroid
  123. CgoCircle
  124. Cgo arrow
  125. Cgo grid
  126. CheatSheet
  127. Check Key
  128. Chem comp cartn use
  129. Chempy
  130. Cheshift
  131. Chromadepth
  132. Cif keepinmemory
  133. Cif use auth
  134. Clip
  135. Cls
  136. Cluster Count
  137. Cluster mols
  138. Collada geometry mode
  139. CollapseSel
  140. Color
  141. ColorByDistance
  142. ColorByGroup
  143. ColorByRMSD
  144. Color By Mutations
  145. Color Objects
  146. Color Values
  147. Color by conservation
  148. Color h
  149. Colorama
  150. Colorblindfriendly
  151. Colorbydisplacement
  152. Command Line Options
  153. Commands
  154. Config Mouse
  155. Connect cutoff
  156. Connect mode
  157. ConnectedCloud
  158. Consistent View/ Map Inspect
  159. Contact Surface
  160. Contact map visualizer
  161. Copy
  162. Count Atoms
  163. Count Frames
  164. Count States
  165. Count molecules in selection
  166. Covers
  167. Create
  168. CreateAtom
  169. CreateSecondaryStructure
  170. Cubes
  171. Current events
  172. Cycle Valence
  173. Cycle valence
  174. Cylinder shader ff workaround
  175. Cyspka
  176. DSSP Stride
  177. DYNMAP
  178. Dash Gap
  179. Dash Length
  180. Dash Radius
  181. Dash Round Ends
  182. Dash Width
  183. Dash color
  184. Dash gap
  185. Dash length
  186. Dash round ends
  187. Dash width
  188. Defer builds mode
  189. Dehydron
  190. Delete
  191. Deprotect
  192. Depth cue
  193. Deselect
  194. Disable
  195. Discrete objects
  196. Displacementmap
  197. Display CCP4 Maps
  198. Display SiteMap Maps
  199. Display scale factor
  200. Displaying Biochemical Properties
  201. Distance
  202. DistancesRH
  203. Distancetoatom
  204. DivScore
  205. Dot radius
  206. Dot width
  207. Dots
  208. Draw
  209. DrawBoundingBox
  210. DrawGridBox
  211. Draw Protein Dimensions
  212. Dss
  213. Dssp
  214. Dssr block
  215. Dump
  216. Dump2CGO
  217. Dunbrack Rotamers
  218. Dynamic mesh
  219. DynoPlot
  220. EMovie
  221. EZ-Viz
  222. Edit
  223. Edit Keys
  224. Editing atoms
  225. Elbow angle
  226. Ellipsoid
  227. Ellipsoid color
  228. Ellipsoid quality
  229. Ellipsoid scale
  230. Ellipsoid transparency
  231. Ellipsoids
  232. Enable
  233. Ending
  234. Ex
  235. Example Scripts
  236. Examples of nucleic acid cartoons
  237. Expand To Surface
  238. Extend
  239. Extend (selection operator)
  240. Extensions
  241. Extra fit
  242. Extract
  243. Fab
  244. Feedback
  245. Fetch
  246. FetchLocal
  247. Fetch Host
  248. Fetch Path
  249. Fetch type default
  250. Fetching scripts

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