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News & Updates New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm. Official Release PyMOL v1.8.0 has been released on Nov 18, 2015. PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015. New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. Older News See Older News.

Did you know... Show as show_as turns on and off atom and bond representations. Details The available representations are the usual: (History: Python 2.6 came out with the keyword as which is also a PyMOL keyword. So, we had to change the PyMOL-named keyword to show_as.) lines spheres mesh ribbon cartoon sticks dots surface labels extent nonbonded nb_spheres slice USAGE show_as representation [, selection ] ARGUMENTS representation = lines, spheres, mesh, ribbon, cartoon, sticks, dots, surface, labels, extent, nonbonded, nb_spheres, slice, extent, slice, dashes, angles, dihedrals, cgo, cell, callback, everything selection = string {default: all} EXAMPLES # show the backbone as lines show_as lines, name ca or name c or name n # show everything as a ribbon show_as ribbon PYMOL API <source lang="python"> cmd.show_as(string representation, ..→

A Random PyMOL-generated Cover. See Covers.