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News & Updates
POSF PyMOL Open-Source Fellowship program accepting applications for 2018-2019
New Plugin ProBiS H2O is a new plugin for identification of conserved waters in protein structures.
Official Release PyMOL v2.1 has been released on March 13, 2018.
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Grid slot

== Overview ==

Sets the grid slot location for a given object.

Syntax

set grid_slot, int, obj

where int is the number of the grid slot and obj is the object to put there.

Additionally, multiple objects can be assigned to the same grid slot by simply specifying different objects to the same grid slot. For example, if you have four objects loaded into PyMOL (A, B, C, D) and you want to show objects A and B in one slot while C and D are in another. Object E is shown in all slots by setting slot to -2:

set grid_slot, 1, A
set grid_slot, 1, B
set grid_slot, 2, C
set grid_slot, 2, D
set grid_slot, -2, E

One use for this representation is in the context of structure prediction/validation (CASP) where you may want to show how your structure looks with respect to the native strucutre versus how somebody else's structure looks with respect to the native. Using grid_slot (as shown) will allow for a clearer, side-by-side comparison rather than the ..→

A Random PyMOL-generated Cover. See Covers.