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Welcome to the PyMOL Wiki!
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News & Updates
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
Official Release PyMOL v1.8.6 has been released on March 9, 2017.
Official Release PyMOL v1.8.4 has been released on October 4, 2016.
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Unset deep

The unset_deep command clears settings on the object, object-state, atom and bond levels.

New in PyMOL 1.8.4

Usage

unset_deep [ settings [, object ]]

Arguments

  • settings = str: space separated list of setting names or empty string for all settings {default: }
  • object = str: name of one object or * for all objects {default: *}

Example

fetch 1rx1, async=0
as cartoon
color green

# object-level
set cartoon_color, blue, 1rx1

# atom-level
set cartoon_color, red, resi 20-30

# clear on all levels
unset_deep cartoon_color

Note

Does currently not unset atom-state level settings.

See Also

A Random PyMOL-generated Cover. See Covers.