This is a read-only mirror of pymolwiki.org

Main Page

From PyMOL Wiki
Revision as of 16:30, 7 February 2018 by Speleo3 (talk | contribs) (poll closed)
Jump to navigation Jump to search
hosted by SBGridlogo2.jpg
Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Official Release PyMOL v2.0 has been released on September 20, 2017.
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
Official Release PyMOL v1.8.6 has been released on March 9, 2017.
Official Release PyMOL v1.8.4 has been released on October 4, 2016.
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Check Key

Type Python Script
Download check_key.py
Author(s) Sean M. Law
License -
This code has been put under version control in the project Pymol-script-repo

DESCRIPTION

A simple script used to check if a given key is valid for for the Set Key command. This is useful when the user would like to use a keyboard key as shortcut/hotkey in their script but need to check if the key is a valid one.

USAGE

load the script using the run command

check_key (keystroke)

If the key specified is a valid one as defined in Set Key then it returns the value of the keystroke. Otherwise, it returns None.

For an example that calls this script, see Jump.

PyMOL API

<source lang="python"> from pymol import cmd import re

allowed_keys=re.compile('(F1|F2|left|right|pgup|pgdn|home|insert|(CTRL-[A-Z])|ALT-[A-Z0-9])')

def check_key (keystroke):

   """
   Author Sean M. Law
   University of Michigan
   seanlaw_(at)_umich_dot_edu
   """
   keystroke=keystroke.strip('\"\)
   out=allowed_keys.search(keystroke)
..→
A Random PyMOL-generated Cover. See Covers.