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My name is Joseph ANDRE. I'm Ph.D student in molecular modelling on tubulin.
I use PyMOL to produce figures and analyse molecular dynamics trajectories.
# SYSTEM set fetch_path, /home/joseph/Documents/structure/ # GUI set internal_gui_mode, 0 set bg_rgb, [0.3,0.3,0.3] viewport 1400,600 set overlay, 4 set orthoscopic,1 set seq_view_label_spacing, 10 set seq_view_label_start, 10 # STYLE set valence, 1 set stick_radius,0.1 color grey90, element C set spec_power, -1 set spec_reflect, 0.05 set ambient, 0.1 ## CARTOON set cartoon_fancy_helices,1 set cartoon_loop_radius,0.1 set cartoon_dumbbell_radius,0.1 set cartoon_dumbbell_width, 0.08 set cartoon_highlight_color, grey40 set cartoon_dumbbell_length, 1.2 set cartoon_rect_width,0.08 set cartoon_rect_length, 1.2 set cartoon_color, grey80, ss L set cartoon_color, orange, ss H set cartoon_color, deepteal, ss S set cartoon_discrete_colors, 1 # SCRIPTS # ALIASES alias hide_lines_nonpolar_h, hide lines, e. H and neighbor e. C alias hide_sticks_nonpolar_h, hide sticks, e. H and neighbor e. C