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===DESCRIPTION===
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'''update''' transfers coordinates from one selection to another.
  "update" transfers coordinates from one selection to another.
 
  
 
===USAGE===
 
===USAGE===
    update (target-selection),(source-selection)
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update (target-selection),(source-selection)
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 +
===PYMOL API===
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<source lang="python">
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cmd.update( target ,source [,target_state=0 [,source_state=0 [,matchmaker=1 [,quiet=1 [,_self=cmd ]]]]]] )
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</source>
 +
 
 +
=== ARGUMENTS ===
 +
 
 +
* '''matchmaker''' = integer: how to match atom pairs {default: 1}
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** 0: assume that atoms are stored in the identical order
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** 1: match based on all atom identifiers (segi,chain,resn,resi,name,alt)
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** 2: match based on ID
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** 3: match based on rank
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** 4: match based on index (same as 0 ?)
 +
 
 +
''Note that the meaning of matchmaker=0 differs in [[update]] and [[fit]] (also [[rms]], [[rms_Cur|rms_cur]], ...)!''
 +
 
 
===EXAMPLES===
 
===EXAMPLES===
    update target,(variant)
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update target,(variant)
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===NOTES===
 
===NOTES===
    Currently, this applies across all pairs of states.  Fine
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Currently, this applies across all pairs of states.  Fine control will be added later.
  control will be added later.
+
 
 
 
===SEE ALSO===
 
===SEE ALSO===
    [[Cmd load]]  
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[[Cmd load]]  
 
 
  
[[Category:Commands|update]]
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[[Category:Commands|Update]]

Latest revision as of 01:44, 28 March 2014

update transfers coordinates from one selection to another.

USAGE

update (target-selection),(source-selection)

PYMOL API

cmd.update( target ,source [,target_state=0 [,source_state=0 [,matchmaker=1 [,quiet=1 [,_self=cmd ]]]]]] )

ARGUMENTS

  • matchmaker = integer: how to match atom pairs {default: 1}
    • 0: assume that atoms are stored in the identical order
    • 1: match based on all atom identifiers (segi,chain,resn,resi,name,alt)
    • 2: match based on ID
    • 3: match based on rank
    • 4: match based on index (same as 0 ?)

Note that the meaning of matchmaker=0 differs in update and fit (also rms, rms_cur, ...)!

EXAMPLES

update target,(variant)

NOTES

Currently, this applies across all pairs of states. Fine control will be added later.

SEE ALSO

Cmd load