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- When saving a PDB file, the [[pdb_conect_all]] settings controls whether PyMOL writes C ...an object-level setting, to again write CONECT records for all bonds when saving that object to a PDB file.1 KB (175 words) - 05:01, 16 November 2015
- ...suppress this feature, set <tt>pdb_use_ter_records</tt> value to 0 before saving protein molecules.992 bytes (149 words) - 03:14, 7 January 2019
- The [[pse_export_version]] setting switches to a legacy format when saving PSEs, so far possible. The value is the floating point number representatio820 bytes (112 words) - 00:07, 17 October 2016
- == Saving default locations ==5 KB (781 words) - 02:21, 20 August 2018
- * When saving a session file, then "state" has no effect.1 KB (230 words) - 00:07, 17 October 2016
- This command is very useful for saving the orientation of a scene for later. Authors of molecular movies may find1 KB (225 words) - 02:13, 14 September 2020
- ===Saving an image=== '''Tip:''' Using the ''[[ray]]'' command before saving an image will create a higher quality version with shadows, etc. This can t12 KB (1,971 words) - 02:46, 3 April 2017
- ==Saving with transformed coordinates==7 KB (1,076 words) - 04:40, 14 December 2015
- ...l.cmd''' namespace. The save command will have enhanced PDB output, namely saving of secondary structure and crystal information, if available. The fetch com5 KB (689 words) - 03:58, 4 March 2019
- then the PyMOL GUI may not have caught up to the correct place before saving the scene information.15 KB (2,259 words) - 02:16, 28 March 2014