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• Python Integration
  pymol example.py # synchronous, in PyMOL module pymol -r example.py # synchronous in __main__ module
  1 KB (213 words) - 04:30, 3 March 2020
• Git include
  == Use of module include == The include module has been restricted to only accept pages from:
  1 KB (181 words) - 02:16, 28 March 2014
• Speleo3/test1
  |type = Python Module
  162 bytes (18 words) - 01:44, 28 March 2014
• TMalign
  |type = module |module = psico.fitting
  2 KB (271 words) - 03:27, 13 November 2017
• Save traj
  |module = psico.exporting
  319 bytes (43 words) - 03:58, 4 March 2019
• H Fill
  [[Category:Editing Module|H Fill]]
  425 bytes (61 words) - 03:06, 28 March 2014
• Get raw distances
  |type = module |module = psico.querying
  2 KB (196 words) - 02:16, 28 March 2014
• AngleBetweenHelices
  |type = Python Module |module = psico.orientation
  2 KB (226 words) - 05:54, 9 January 2017
• Pml2py
  # use 'cmd' module if possible module = 'cmd'
  4 KB (467 words) - 04:30, 3 March 2020
• Quit
  [[Category:Input Output Module|Quit]]
  304 bytes (37 words) - 04:05, 7 December 2020
• Angle between domains
  |type = module |module = psico.orientation
  2 KB (228 words) - 05:54, 9 January 2017
• Move
  [[Category:View Module|Move]]
  393 bytes (50 words) - 15:34, 11 July 2014
• Redo
  [[Category:Editing Module|Redo]]
  354 bytes (47 words) - 03:21, 22 June 2021
• Morpheasy linear
  |module = psico.morphing
  780 bytes (99 words) - 03:42, 24 June 2019
• Plot noe
  |type = module
  652 bytes (83 words) - 02:16, 28 March 2014
• Mark center
  |type = module
  717 bytes (97 words) - 06:13, 6 March 2017
• Supercell
  |module = psico.xtal
  900 bytes (121 words) - 16:19, 20 July 2020
• Colorblindfriendly
  === Import as a module === After importing the module, call the <code>set_colors()</code> function to add the colors to PyMOL's c
  4 KB (585 words) - 04:50, 11 December 2017
• Disable
  [[Category:View Module|Disable]]
  636 bytes (90 words) - 23:57, 20 May 2014
• Launching PyMOL
  pymol example.py # synchronous, in PyMOL module pymol -r example.py # synchronous in __main__ module
  6 KB (991 words) - 02:16, 28 March 2014
• Centroid
  |type = module
  821 bytes (102 words) - 00:06, 17 October 2016
• Uniprot features
  |type = Python Module
  971 bytes (124 words) - 04:07, 28 March 2014
• PoseView
  |type = module
  1 KB (124 words) - 04:20, 4 February 2019
• Morpheasy
  |module = psico.morphing
  1,022 bytes (130 words) - 03:42, 24 June 2019
• View
  [[Category:View Module|View]]
  723 bytes (109 words) - 15:34, 11 July 2014
• Inertia tensor
  |type = Python Module
  981 bytes (140 words) - 02:16, 28 March 2014
• Minimize ob
  |module = psico.minimizing
  1 KB (148 words) - 03:23, 29 April 2019
• Enable
  [[Category:View Module|Enable]]
  886 bytes (130 words) - 23:57, 20 May 2014
• Grepset
  |module = psico.helping
  1 KB (152 words) - 06:13, 6 March 2017
• XFree86 Configuration
  Section "Module"
  1 KB (116 words) - 04:07, 28 March 2014
• Sst
  |module = psico.editing
  1 KB (136 words) - 03:27, 13 November 2017
• Multifilesave
  [[Category:Input Output Module]]
  1,002 bytes (127 words) - 02:21, 20 August 2018
• Hide
  [[Category:View Module|Hide]]
  1 KB (147 words) - 23:57, 20 May 2014
• Pymol.stored
  ...-like commands. The [[iterate]] commands by default expose the '''pymol''' module namespace as the [https://docs.python.org/2/library/functions.html#eval glo
  1 KB (163 words) - 02:44, 1 May 2017
• Fnab
  [[Category:Editing Module]]
  1 KB (153 words) - 03:14, 7 January 2019
• Extend
  ...n the global '''cmd''' module to '''_self''', or if using the '''pymol2''' module, an instance of '''pymol2.cmd2.Cmd'''. This wrapper allows running multiple This example provides a command help, does proper type conversion of arguments and would work with '''pymol2'''.
  4 KB (556 words) - 05:40, 25 July 2018
• Apropos
  |module = psico.helping ###EXACT MATCH FOR: fit ==> try 'help fit' at the prompt.
  5 KB (730 words) - 03:58, 4 March 2019
• Orient
  [[Category:View Module|Orient]]
  1 KB (183 words) - 02:16, 28 March 2014
• Get colors
  |type = Python Module
  2 KB (231 words) - 15:24, 26 November 2014
• Movie color fade
  |type = Python Module help movie_color_fade
  1 KB (204 words) - 15:24, 26 November 2014
• Msms surface
  |module = psico.msms
  1 KB (173 words) - 03:27, 13 November 2017
• PluginArchitecture
  A plugin is a Python module which uses PyMOL's API. The following entrypoints add functionality to PyMO * multiple files per plugin/module (see [[#More than one file per plugin]])
  4 KB (547 words) - 03:24, 10 December 2018
• Join states
  |module = psico.creating
  1 KB (186 words) - 05:54, 9 January 2017
• Load aln
  |module = psico.importing
  2 KB (199 words) - 18:09, 3 April 2018
• Intra xfit
  |module = psico.fitting
  1 KB (192 words) - 03:27, 13 November 2017
• Save
  [[Category:Input Output Module|Save]]
  1 KB (230 words) - 00:07, 17 October 2016
• Protect
  [[Category:Editing Module|Protect]]
  1 KB (179 words) - 05:26, 8 February 2016
• FindSurfaceResidues
  |type = module
  2 KB (219 words) - 03:11, 1 April 2019
• Movie fade
  |type = Python Module This script will help fade in and out settings in a movie. Just specify the setting, it's initial
  1 KB (193 words) - 02:46, 3 April 2017
• Theseus
  |module = psico.fitting ...n, like, align, none or the name of an alignment object (see [[local_rms]] help for details) {default: align}
  2 KB (196 words) - 19:27, 29 May 2018

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