This is a read-only mirror of pymolwiki.org
Search results
Jump to navigation
Jump to search
Page title matches
- The '''internal GUI''' is the GUI that is natively built into PyMOL. Hide the internal gui with,450 bytes (74 words) - 03:06, 28 March 2014
- This sets how PyMOL renders the internal GUI & controls. The default setting, 0. [[:Category:GUI|GUI Category]], [[Internal_gui]]514 bytes (76 words) - 02:16, 28 March 2014
- This sets how large the internal gui controls are. An internal GUI control is the button you click on to enable/disable a protein, select colo [[Category:GUI|GUI Category]]540 bytes (79 words) - 03:06, 28 March 2014
Page text matches
- The '''internal GUI''' is the GUI that is natively built into PyMOL. Hide the internal gui with,450 bytes (74 words) - 03:06, 28 March 2014
- This sets how PyMOL renders the internal GUI & controls. The default setting, 0. [[:Category:GUI|GUI Category]], [[Internal_gui]]514 bytes (76 words) - 02:16, 28 March 2014
- This sets how large the internal gui controls are. An internal GUI control is the button you click on to enable/disable a protein, select colo [[Category:GUI|GUI Category]]540 bytes (79 words) - 03:06, 28 March 2014
- [[:Category:GUI|GUI Category]], [[Internal_gui]] [[Category:GUI]]737 bytes (107 words) - 02:16, 28 March 2014
- [[File:PyMOLProbity_GUI.png|480px|thumb|right|The PyMOLProbity GUI can be used to inspect and adjust clashes and flip orientations of flippabl interface (GUI) for general point-and-click use, and a command-line interface3 KB (425 words) - 03:23, 29 April 2019
- ====GUI==== Ed. As of 0.98bXX there is a GUI-enable Ball & Stick representation available to users.2 KB (319 words) - 21:08, 9 July 2015
- The [[Keyboard Shortcut Menu]] is a GUI panel that can create, modify, delete, and reset keyboard shortcuts. This f [[Category:GUI]]1 KB (192 words) - 03:21, 22 June 2021
- === Example for a PyQt5 GUI (PyMOL 2.x) === === Example for a legacy Tkinter GUI (PyMOL 1.x) ===4 KB (547 words) - 03:24, 10 December 2018
- will create a new color that will appear in the GUI list. From the open-source GUI you can use the "add" button in the color list viewer.2 KB (273 words) - 19:27, 29 May 2018
- ...e the "F" button in the bottom-right corner of the [[Internal_Gui|internal GUI]] to toggle full screen.434 bytes (71 words) - 02:16, 28 March 2014
- The [[Builder]] is a PyMOL GUI menu that allows you to easily build up structures by hand from various ele To access the [[Builder]] simply select the "Builder" option from the PyMOL GUI (see images).2 KB (333 words) - 03:21, 22 June 2021
- === Creating a GUI === === Filling the GUI with Widgets ===4 KB (636 words) - 03:42, 24 June 2019
- === Open PyMOL GUI === In PyMOL GUI, go to <code>Plugin</code> > <code>Plugin Manager</code> > <code>Install Ne5 KB (668 words) - 03:40, 3 February 2020
- When set, [[Suspend_updates]] stops PyMOL from updating the GUI whenever changes are made. This can be used to mask multiple operations fr668 bytes (98 words) - 23:57, 20 May 2014
- The [[display_scale_factor]] setting scales the [[internal gui]], the [[internal prompt]], label fonts etc. by a multiple of 1. The settin608 bytes (85 words) - 19:48, 29 May 2017
- ...ng|thumb|Screenshot of the <code>cb_colors</code> color menu in the OpenGL GUI in PyMOL 2.0.]] One can also add an entry to the color menu in the right-side OpenGL GUI. So clicking on [C], there will now be a <code>cb_colors</code> menu item,4 KB (585 words) - 04:50, 11 December 2017
- -A3 internal GUI only, no splash (-qx -X 68 -Y 100) -K keep alive: when running without a GUI, don't quit after the input5 KB (729 words) - 04:31, 26 June 2017
- ...pymol.cmd function will automatically start a backend process without the GUI in the main thread. "finish_launching" should not be necessary, and will la ....html VisBox]. It runs PyMol fullscreen stereo, and disables the internal gui.4 KB (675 words) - 05:13, 26 May 2020
- ...ing the object in the list in the top panel of the [[Internal_gui|Internal GUI]].636 bytes (90 words) - 23:57, 20 May 2014
- [[Category:GUI]]636 bytes (86 words) - 03:05, 1 March 2021
- *** Asynchronous thread (GUI possible) ** Running PyMOL standalone, with [[RPC]] communication (GUI possible)3 KB (392 words) - 03:43, 6 December 2021
- [[Image:Azahar_GUI.png|480px|thumb|Azahar GUI.]] The plugin's GUI displays three interactive tabs: Creation, Visualization and Calculations.6 KB (985 words) - 05:01, 22 June 2020
- ...g, reinitialization or views changed directly by the [[view]] command. The GUI shows incorrect entries on these situations, reopen to update.898 bytes (125 words) - 02:11, 24 November 2019
- ...selecting the object in the list at the top of the [[Internal_gui|Internal GUI]].886 bytes (130 words) - 23:57, 20 May 2014
- MOLE 2.5 is available as a [https://webchem.ncbr.muni.cz/Platform/App/Mole GUI application] with in-built molecular browser enabling user interactive work * GUI application is available for Windows with [http://www.microsoft.com/en-us/d3 KB (468 words) - 02:39, 24 July 2017
- == GUI ==4 KB (614 words) - 03:24, 10 December 2018
- ...s and want a movie ''now'' then read this section. It mostly involves the GUI for making movies, so get your mouse ready. :: '''Action->Preset->Technical''' (on the object in the viewer gui)3 KB (425 words) - 02:16, 28 March 2014
- ...puter about 2 minutes just to prepare the surface for showing in the PyMOL GUI (this does not include any ray-tracing or rendering). Lastly, ray tracing1 KB (182 words) - 03:27, 14 November 2016
- ==Using the GUI== [[Image:pytms_menu.png|500 px|PyTMs GUI]]<br>9 KB (1,151 words) - 04:40, 14 December 2015
- * [[MSMS]] (plugin with GUI)1 KB (173 words) - 03:27, 13 November 2017
- On my Mac I also had to install a new version of the Pmw module (for the GUI). You can get it here: The GUI should then appear and look like this:5 KB (840 words) - 05:13, 26 May 2020
- [[Image:optimize.png|380px|thumb|<b>Figure 0</b>: Optimize plugin GUI]] ...mized. From the command line, the default value is 'all'. When using the GUI, the default value is the first uploaded object.6 KB (815 words) - 03:23, 29 April 2019
- * [[DSSP Stride]] (plugin with GUI)1 KB (210 words) - 03:27, 13 November 2017
- * Windows Explorer Integration -> Context Menu Entries -> Git Bash Here + Git GUI here # Right click in folder -> Select: Git Gui -> Clone Existing Repository5 KB (711 words) - 03:24, 10 December 2018
- ...n with the same two-window GUI which PyMOL uses on Windows and Linux. This GUI has some additional features, like the [[Plugins|Plugin]] menu and the [[Bu5 KB (752 words) - 04:22, 12 November 2018
- Actions are undoable via GUI menu (Edit -> Undo). The undo feature may be manually disabled by uncheckin2 KB (272 words) - 03:21, 22 June 2021
- The GUI is relatively straightforward, if you follow it from top to bottom, and the == GUI Options ==8 KB (1,334 words) - 18:29, 25 May 2022
- * Easy to use GUI, to take advantage of complex software GROMACS. ...g/doi/abs/10.1021/ci400071x Molecular Dynamics Simulation by GROMACS Using GUI Plugin for PyMOL Tomasz Makarewicz and Rajmund Kaźmierkiewicz Journal of C6 KB (822 words) - 03:27, 13 November 2017
- ...neath a '''+''' sign in the object tree (see images) in the Pymol Internal Gui.2 KB (312 words) - 19:48, 29 May 2017
- ...rightmost buttons in the object list (in the upper right part of the main GUI window. The [[Color]] command will do the same. Or activate ''Cartoon -> Discrete Colors'' in the GUI menu.6 KB (849 words) - 03:47, 7 March 2016
- The upper window entitled '''PyMOL Tcl/Tk GUI''' controls the general settings and functionalities of the program while t ...button mouse you can change the mode in the '''Mouse''' menu in the Tcl/Tk GUI window. <br>17 KB (2,610 words) - 19:16, 20 May 2014
- Run PyMOL without the external GUI and provide absolute paths for arguments:3 KB (433 words) - 04:50, 11 December 2017
- ...ttp://www.kde-apps.org/content/show.php/Gromacs+GUI+?content=47665 Gromacs GUI] ...a plugin-manager GUI in the style of Firefox, Rythmbox, Gedit, Eclipse. A GUI where it is easy to turn off/on plugins, configure them and see help-conten17 KB (2,322 words) - 01:04, 19 October 2015
- ...://github.com/schrodinger/pmw-patched Pmw] (Python Megawidgets, for legacy GUI/plugins)5 KB (713 words) - 05:01, 22 June 2020
- ...OL is opened, two windows appear. The smaller window (called the "External GUI" in PyMOL documentation) contains the menu bar ('''File''', '''Edit''', ''' *[[Biochemistry_student_intro]] Basic use of GUI and script12 KB (1,971 words) - 02:46, 3 April 2017
- Color by spectrum is in the GUI menu but did you realize that the spectrum is not limited to a simple rainb6 KB (1,020 words) - 02:11, 24 November 2019
- ...n for PyMOL which adds additional functionalities and presets to the PyMOL GUI.8 KB (934 words) - 05:42, 31 May 2016
- GUI where plugin window supplements PyMOL default control and display windows.7 KB (1,055 words) - 19:27, 29 May 2018
- * Cleaner GUI.8 KB (1,116 words) - 05:42, 31 May 2016
- '''PyMOL plugin that provides show_contacts command and GUI12 KB (1,422 words) - 03:11, 1 April 2019