This is a read-only mirror of pymolwiki.org
Search results
Jump to navigation
Jump to search
- This script converts a pml script to a python script. ...d=27331786 pymol-users mailing list] (Subject: Convert pml script to Pymol Python script, Fri, 8 Apr 2011).4 KB (467 words) - 04:30, 3 March 2020
- ...about porting your existing scripts and plugins to Python 3, while keeping Python 2 compatibility. ...We'll exclude all <code>import</code> fixes here, because we want to use a Python 2 compatible fix instead.6 KB (838 words) - 18:47, 19 September 2019
- ...hould run in the same interpreter, they need to be installed into the same Python environment. [[RPC]] also works with two independent environments. [[Linux Install|Compile and install]] PyMOL with the same Python that you use with Jupyter, into the same environment.3 KB (392 words) - 03:43, 6 December 2021
- * [http://www.python.org/ Python] 3.6+ * [https://github.com/schrodinger/pmw-patched Pmw] (Python Megawidgets, for legacy GUI/plugins)5 KB (713 words) - 05:01, 22 June 2020
- Plugins can be single Python files (*.py) or directories with an <code>__init__.py</code> file (see [[Pl Plugins were limited to single Python files, directories were not supported yet.1 KB (211 words) - 03:24, 10 December 2018
- <source lang="python"> <source lang="python">534 bytes (77 words) - 02:16, 28 March 2014
- '''wizard''' launches one of the built-in wizards. There are special Python scripts which work with PyMOL in order to obtain direct user interaction an <source lang="python">557 bytes (75 words) - 04:07, 28 March 2014
- PyMOL can be started from the command line or from a Python script. Also, PyMOL has lots of [[Command_Line_Options|command line option <source lang="python">6 KB (991 words) - 02:16, 28 March 2014
- <source lang="python"> <source lang="python">2 KB (261 words) - 02:16, 28 March 2014
- ...n directory is most likely C:\Users\<Your Username>\AppData\Local\Programs\Python\Python38). Make sure the option to add environment variables is selected. Navigate to the installation directory in a CMD window <source lang = python>cd C:\Users\<Your Username>\Downloads\PyMOL_installation</source> (or where5 KB (746 words) - 03:21, 22 June 2021
- <source lang="python"> <source lang="python">2 KB (281 words) - 02:16, 28 March 2014
- Chempy is a python-importable module that can be used to write PyMOL-executable [[scripts]]. <source lang="python">5 KB (326 words) - 01:43, 28 March 2014
- A plugin is a Python module which uses PyMOL's API. The following entrypoints add functionality <syntaxhighlight lang="python">4 KB (547 words) - 03:24, 10 December 2018
- The recommended way to run PyMOL-Python scripts is by using PyMOL as the interpreter. This is supported by all vers ...ers, the following PyMOL versions also allow to run PyMOL from an existing Python process:4 KB (675 words) - 05:13, 26 May 2020
- ...er_state''' changes the atomic coordinates of a particular state using the python evaluator with a separate name space for each atom. The symbols defined in <source lang="python">634 bytes (92 words) - 07:02, 3 January 2016
- ** Example 1: Python Code | style="padding: 3em;" |<nowiki><source lang="python"></nowiki><br />6 KB (928 words) - 00:49, 28 March 2014
- cctbx and PyMOL need to be compiled with the same Python distribution, otherwise they won't be compatible.948 bytes (119 words) - 04:05, 7 December 2020
- * All command arguments are passed as strings to the Python function. This may require type conversion before those arguments can be us ...fault '''quiet=1''' argument and have no (or little) output when used in a Python script, but would print a more verbose feedback when invoked as a command.4 KB (556 words) - 05:40, 25 July 2018
- <source lang="python"> ...red with [https://docs.python.org/2/howto/unicode.html#unicode-literals-in-python-source-code unicode literals] as 4-digit hexadecimal escape sequences.2 KB (330 words) - 01:14, 28 August 2017
- |type = Python Module <syntaxhighlight lang="python">971 bytes (124 words) - 04:07, 28 March 2014