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• Older News
  * New Plugin: [[Lisica|LiSiCA]] is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm. ...g Nvidia GeForce video cards] (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
  13 KB (1,965 words) - 03:24, 10 December 2018
• Kabsch
  accept coordinates in the form an array of 3D vectors/lists and then pairs may become 3D (r1, r2, weight) or I may add another
  26 KB (4,053 words) - 03:23, 29 April 2019
• PyMod
  ...target-template sequence alignment and model building) in order to build a 3D atomic model of a target protein (or protein complex). Additionally, PyMod
  4 KB (539 words) - 04:05, 7 December 2020
• Align
  * graphical representation of aligned atom pairs as lines in the 3D viewer
  4 KB (558 words) - 04:50, 11 December 2017
• Ideas
  * R (statistics): PyMOL a 3D viewer environment for visualizating & manipulating large statistical data * Provide a 2D chemical depiction of the current 3D view.
  17 KB (2,322 words) - 01:04, 19 October 2015
• Command Line Options
  ||'''.cc1, .cc2''' || ChemDraw 3D cartesian coordinate file
  5 KB (729 words) - 04:31, 26 June 2017
• Practical Pymol for Beginners
  ...is the PyMOL Viewer, which is where all the magic happens. In the Viewer, 3D models are displayed, and the user interacts (eg rotates) and manipulates t The objects that PyMOL renders in 3D are loaded from coordinate files that describe (in great detail) locations
  12 KB (1,971 words) - 02:46, 3 April 2017
• CMPyMOL
  ...software to molecular visualization program PyMOL. It combines the protein 3D visualization capabilities of PyMOL and the protein's 2D contact map with a
  8 KB (1,116 words) - 05:42, 31 May 2016
• Modeling and Editing Structures
  (axis can be either the letter x,y,z or a 3D vector [x,y,z])
  7 KB (1,076 words) - 04:40, 14 December 2015
• AKMT Lys pred
  This script should try to make an analysis this for 3D, with residues up and downstream in angstrom distance to the residue of int
  8 KB (1,074 words) - 02:39, 24 July 2017
• Biochemistry student intro
  * [[3d_pdf | 3d protein image in pdf]]
  17 KB (2,610 words) - 19:16, 20 May 2014
• PLoS
  The possible types of 3D figures and animations are enumerated in Table 1. Below the symbol for each
  41 KB (6,131 words) - 18:10, 31 October 2015

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