Main Page

hosted by

Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org

News & Updates
POSF	New PyMOL fellows announced for 2018-2019
Tutorial	Plugins Tutorial updated for PyQt5
Official Release	PyMOL v2.2 has been released on July 24, 2018.
New Plugin	ProBiS H2O is a new plugin for identification of conserved waters in protein structures.
Selection keywords	New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update	MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script	dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News	See Older News.

Did you know...
CgoCircle = Overview = This script will create a CGO circle with the origin at the specified X,Y,Z coordinates. Also, you can specify the radius and the colors. See the examples. If you want to draw a circle around an object or selection, use circleSelection. If you want pure flexibility over your circle then use cgoCircle. There are two functions here: cgoCircle — creates a CGO circle at some user-specified location circleSelection —creates a circle around the named object or selection. Drawn circle. CGO circle. Circles of specified radius. Circle with specified width. Circle with a line width of 150. Pores anyone? Usage <source lang="python"> import math import pymol from pymol.cgo import * import random def cgoCircle(x, y, z, r=8.0, cr=1.0, cg=0.4, cb=0.8, w=2.0): """ Create a CGO circle PARAMS x, y, z X, Y ..→

A Random PyMOL-generated Cover. See Covers.

Usage