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Difference between revisions of "Intra rms"

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===SEE ALSO===
 
===SEE ALSO===
   fit, rms, rms_cur, intra_fit, intra_rms_cur, pair_fit  
+
   [[Cmd fit]], [[Cmd rms]], [[Cmd rms_cur]], [[Cmd intra_fit]], [[Cmd intra_rms_cur]], [[Cmd pair_fit ]]
  
 
[[Category:Commands|intra_rms]]
 
[[Category:Commands|intra_rms]]

Revision as of 05:30, 21 February 2005

DESCRIPTION

  "intra_rms" calculates rms fit values for all states of an object
  over an atom selection relative to the indicated state.  
  Coordinates are left unchanged.  The rms values are returned
  as a python array.

PYMOL API

cmd.intra_rms( string selection, int state)

PYTHON EXAMPLE

  from pymol import cmd
  rms = cmd.intra_rms("(name ca)",1)

USER EXAMPLES/COMMENTS

SEE ALSO

  Cmd fit, Cmd rms, Cmd rms_cur, Cmd intra_fit, Cmd intra_rms_cur, Cmd pair_fit