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Difference between revisions of "Get Model"
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===DESCRIPTION=== | ===DESCRIPTION=== | ||
| − | + | '''get_model''' returns a model object. | |
| − | + | ||
===PYMOL API=== | ===PYMOL API=== | ||
| − | + | <source lang="python"> | |
| − | + | cmd.get_model(string "selection" ) | |
| − | + | </source> | |
| − | + | ||
===USAGE=== | ===USAGE=== | ||
| − | + | cmd.get_model("chain A") | |
===NOTES=== | ===NOTES=== | ||
| Line 15: | Line 15: | ||
atoms = cmd.get_model("chain A") | atoms = cmd.get_model("chain A") | ||
for at in atoms.atom: | for at in atoms.atom: | ||
| − | print "ATOM DEFINITION: "+at.chain+" "+at.resn+" "+str(at.resi)+" "+at.name+" "+str(at.index) | + | print "ATOM DEFINITION: "+at.chain+" "+at.resn+" "+str(at.resi)+" "+at.name+" "+str(at.index)+" "+at.b+" "+str(at.coords[0])+" "+str(at.coords[1])+" "+str(at.coords[2]) |
</source> | </source> | ||
===SEE ALSO=== | ===SEE ALSO=== | ||
| − | |||
[[Category:Commands|get_model]] | [[Category:Commands|get_model]] | ||
Revision as of 18:39, 26 September 2007
DESCRIPTION
get_model returns a model object.
PYMOL API
cmd.get_model(string "selection" )
USAGE
cmd.get_model("chain A")
NOTES
It can be useful to loop through all the atoms of a selection (rather than using the iterate command)
atoms = cmd.get_model("chain A")
for at in atoms.atom:
print "ATOM DEFINITION: "+at.chain+" "+at.resn+" "+str(at.resi)+" "+at.name+" "+str(at.index)+" "+at.b+" "+str(at.coords[0])+" "+str(at.coords[1])+" "+str(at.coords[2])