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[http://swift.cmbi.ru.nl/gv/dssp/ DSSP] and [http://webclu.bio.wzw.tum.de/stride/ Stride] are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py this link].
 
[http://swift.cmbi.ru.nl/gv/dssp/ DSSP] and [http://webclu.bio.wzw.tum.de/stride/ Stride] are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py this link].
  
= Reference =
+
= External links =
 
[[File:demo_DSSP_plugin_1pyg.png|400px|thumb|right|Demonstration of DSSP plugin (pdb:1pyg).]]
 
[[File:demo_DSSP_plugin_1pyg.png|400px|thumb|right|Demonstration of DSSP plugin (pdb:1pyg).]]
 
+
Most recent code on github:
 
https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py
 
https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py
  
 +
Original site (not updated anymore):
 
http://www.biotec.tu-dresden.de/~hongboz/dssp_pymol/dssp_pymol.html
 
http://www.biotec.tu-dresden.de/~hongboz/dssp_pymol/dssp_pymol.html
  
 
[[Category:Plugins]]
 
[[Category:Plugins]]
 
[[Category:Pymol-script-repo]]
 
[[Category:Pymol-script-repo]]

Revision as of 08:40, 12 April 2012

Introduction

Type PyMOL Plugin
Download plugins/dssp_stride.py
Author(s) Hongbo Zhu
License -
This code has been put under version control in the project Pymol-script-repo

DSSP and Stride are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from this link.

External links

Demonstration of DSSP plugin (pdb:1pyg).

Most recent code on github: https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py

Original site (not updated anymore): http://www.biotec.tu-dresden.de/~hongboz/dssp_pymol/dssp_pymol.html