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Difference between revisions of "DrawGridBox"

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fetch 1cbh
 
fetch 1cbh
 
show surface
 
show surface
drawgridbox 1cbh, nx=5, ny=5,nz=5, g=0, b=0
+
drawgridbox 1cbh, nx=5, ny=5, lw=1, nz=5, g=0, b=0
 
</source>
 
</source>
  
[[File:Gridbox.png]]
+
[[File:Drawgridbox.png]]
  
 
<source lang="python">
 
<source lang="python">
drawgridbox 1cbh, nx=5, ny=5,nz=5, padding=2, r=0, g=0
+
drawgridbox 1cbh, nx=5, ny=5,nz=5, padding=5, lw=1, r=0, g=0
 
</source>
 
</source>
  
[[File:Gridbox padding.png]]
+
[[File:Drawgridbox padding.png]]
  
  

Revision as of 18:17, 25 May 2016

Type Python Script
Download drawgridbox.py
Author(s) Cunliang Geng
License BSD-2-Clause
This code has been put under version control in the project Pymol-script-repo

This script adds the drawgridbox command, which draw grid boxes around a selection.

Usage

 drawgridbox [ selection,  [nx, [ny, [nz, [padding, [lw, [r, [g, [b]]]]]]]]]


Prameters

  • selection = str: atom selection {default: all}
  • nx = int: number of grids on axis X {default: 10}
  • ny = int: number of grids on axis Y {default: 10}
  • nz = int: number of grids on axis Z {default: 10}
  • padding = float: default 0.0
  • lw = float: line width {default: 2.0}
  • r = float: red color component, valid range is [0.0, 1.0] {default 1.0}
  • g = float: green color component, valid range is [0.0, 1.0] {default 1.0}
  • b = float: blue color component, valid range is [0.0, 1.0] {default 1.0}


Examples

Combining DSSR block representation with regular PyMOL cartoons:

load drawgridbox.py
fetch 1cbh
show surface
drawgridbox 1cbh, nx=5, ny=5, lw=1, nz=5, g=0, b=0

Drawgridbox.png

drawgridbox 1cbh, nx=5, ny=5,nz=5, padding=5, lw=1, r=0, g=0

Drawgridbox padding.png