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Difference between revisions of "Connect mode"

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(connect_mode=4)
(ccd link)
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* 2 = distance-based, ignores CONECT records
 
* 2 = distance-based, ignores CONECT records
 
* 3 = CONECT records and distance  
 
* 3 = CONECT records and distance  
* 4 = ''(new in PyMOL 1.7.4)'' for loading mmCIF, read [http://deposit.pdb.org/cc_dict_tut.html components.cif] from the current directory
+
* 4 = ''(new in PyMOL 1.7.4)'' for loading mmCIF, read [http://www.wwpdb.org/data/ccd components.cif] from the current directory
  
 
= Syntax =
 
= Syntax =

Revision as of 19:39, 3 April 2015

Overview

Sets how bonds are made when loading a file.

Values:

  • 0 = distance-based and CONECT records
  • 1 = CONECT records
  • 2 = distance-based, ignores CONECT records
  • 3 = CONECT records and distance
  • 4 = (new in PyMOL 1.7.4) for loading mmCIF, read components.cif from the current directory

Syntax

# ignore CONECT records
set connect_mode, 2

See Also

Load, Connect_cutoff, Connect_bonded