This is a read-only mirror of pymolwiki.org

Difference between revisions of "Cartoon gap cutoff"

From PyMOL Wiki
Jump to navigation Jump to search
m (2 revisions)
(cartoon_sampling)
Line 12: Line 12:
  
 
[[File:cartoon_gap_cutoff.png]]
 
[[File:cartoon_gap_cutoff.png]]
 +
 +
== Number of dashes ==
 +
 +
The number of dashes is directly affected by the [[cartoon_sampling]] setting:
 +
 +
set cartoon_sampling, 20
  
 
== See Also ==
 
== See Also ==
  
 
* [[cartoon]] dash
 
* [[cartoon]] dash
 +
* [[cartoon_sampling]]
  
 
[[Category:Settings]]
 
[[Category:Settings]]

Revision as of 15:45, 13 December 2017

With cartoon_gap_cutoff > 0, if there are missing residues along the protein backbone (e.g. missing loops), PyMOL will create a dashed cartoon loop segment if the gap (in number of residues) is shorter than the cutoff.

New in PyMOL 1.8.2

Example

set cartoon_gap_cutoff, 10

fetch 2xwu, async=0
as cartoon
orient B//152-156/

Cartoon gap cutoff.png

Number of dashes

The number of dashes is directly affected by the cartoon_sampling setting:

set cartoon_sampling, 20

See Also