Description
A small plugin containing functions to make working with multi-pdb structures easier, most notably ribosomes.
The menu options include a call-out to a csv file containing all (as of ~2012) the extant pdb entries with
ribosomal structures.
It includes functionality to color modified bases (pseudouridines and methyls) for those
species I found referenced annotations.
Similarly, it includes helix definitions using the comparative rna web site:
http://www.rna.icmb.utexas.edu/ for those species that I wanted to play with the tRNA entrance tunnel.
Example of use
Perform a git pull using the instructions at: https://github.com/abelew/ribosome_pymol
Depending on your installation of pymol, you may need to set the environment variable 'PYMOL_HOME' in order for the
plugin installer to succeed.
Once complete, click on 'Plugin -> Ribosome' and to view my favorite ..→
