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- 0.99beta11
- 2. Translucent Surfaces
- 2to3
- Aa codes
- AlphaToAll
- Ambient
- Annotation wizard
- Atom name wildcard
- Attach
- AutoMultiFit
- Auto zoom
- Average b
- Axes
- Bg Color
- Blender
- Bounding Box
- Builder
- Button
- Button mode name
- CCTBX-fedora32
- CGO Text
- CMYK
- Cache
- Capture
- Cart to frac
- Cartoon discrete colors
- Cartoon fancy sheets
- Cartoon flat cycles
- Cartoon highlight color
- Cartoon rect length
- Cartoon rect width
- Cartoon round helices
- Cavity cull
- Cd
- Cell
- CgoCircle
- CheatSheet
- Chem comp cartn use
- Cif keepinmemory
- Cif use auth
- Cls
- Cluster Count
- CollapseSel
- Color By Mutations
- Color h
- Command Line Options
- ConnectedCloud
- Consistent View/ Map Inspect
- Contact Surface
- Count Atoms