Morpheasy

Note: The morph command added in PyMOL 1.6 is very similar to morpheasy

Included in psico This command or function is available from psico, which is a PyMOL extension.
Module	psico.morphing

morpheasy does a molecular morph between two conformations, based on sequence alignment. It's a proxy for the morph command but provides a simpler and more convenient workflow.

Like the morph command itself, this will only work with incentive PyMOL builds, not with open-source PyMOL.

Usage

morpheasy source, target [, source_state [, target_state [, name ]]]

Arguments

• source = string: atom selection of first conformation
• target = string: atom selection of second conformation
• name = string: name of output object to create {default: morph01}

Example

import psico.fullinit

fetch 1akeA 4akeA, async=0
extra_fit
morpheasy 1akeA, 4akeA

See Also

• morph
• morpheasy_linear