This is a read-only mirror of pymolwiki.org

Difference between revisions of "Caver3"

From PyMOL Wiki
Jump to navigation Jump to search
(created)
 
m (2 revisions)
 
(8 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
{{Infobox script-repo
 
{{Infobox script-repo
 
|type = plugin
 
|type = plugin
|download = http://www.caver.cz
+
|download = https://github.com/loschmidt/caver-pymol-plugin/archive/master.zip
 
|author = CAVER Team
 
|author = CAVER Team
|license = GPL
+
|license = [https://www.gnu.org/licenses/gpl-3.0.html GPLv3]
 +
|homepage = http://www.caver.cz
 
}}
 
}}
  
Line 11: Line 12:
 
== Installation ==
 
== Installation ==
  
For Linux and Mac, the following modifications allow having all plugin files in one directory:
+
# Install [https://java.com/en/download/ Java]
 +
# Install [https://github.com/loschmidt/caver-pymol-plugin/archive/master.zip caver-pymol-plugin-master.zip] using the PyMOL [[Plugin Manager]]
  
(1) Move '''Caver3_0_1.py''' to '''Caver3/__init__.py'''
+
[[File:PluginManagerCaverPlugin301_fixed.png|345px]]
 
 
cd caver_3.0_plugin/linux_mac
 
mv Caver3_0_1.py Caver3/__init__.py
 
 
 
(2) Edit '''Caver3/__init__.py''' on line 64:
 
 
 
CAVER3_LOCATION = os.path.dirname(__file__)
 
 
 
(3) Use the [[Plugin Manager]] to install '''Caver3/__init__.py''', or manually move '''Caver3''' to '''~/.pymol/startup'''
 
  
 
== See Also ==
 
== See Also ==

Latest revision as of 05:32, 19 August 2019

Type PyMOL Plugin
Download https://github.com/loschmidt/caver-pymol-plugin/archive/master.zip
Author(s) CAVER Team
License GPLv3
http://www.caver.cz

The Caver3 plugin is the successor of Caver2. CAVER is a software tool for analysis and visualization of tunnels and channels in protein structures.

Installation

  1. Install Java
  2. Install caver-pymol-plugin-master.zip using the PyMOL Plugin Manager

PluginManagerCaverPlugin301 fixed.png

See Also