Difference between revisions of "Grepset"

	Included in psico; This command or function is available from psico, which is a PyMOL extension.
Module	psico.helping

Type	Python Script
Download	grepset.py
Author(s)	Ezequiel Panepucci
License	BSD
	This code has been put under version control in the project Pymol-script-repo

Latest revision as of 06:13, 6 March 2017

Use this little script to explore PyMOL's myriad settings.

Usefull for newbies and those with not so good memory skills...

To use:

put the script in a file called grepset.py
from within PyMOL execute run grepset.py. If you have the Pymol-script library configured, then import grepset
try it out, see examples below.

Example 1: grepset light

cartoon_highlight_color        default
dot_lighting                   on
light                          [ -0.40000, -0.40000, -1.00000 ]
mesh_lighting                  off
two_sided_lighting             off
5 settings matched

Example 2: grepset trans

cartoon_transparency           0.00000
ray_transparency_contrast      1.00000
ray_transparency_shadows       1
ray_transparency_spec_cut      0.90000
ray_transparency_specular      0.40000
sphere_transparency            0.00000
stick_transparency             0.00000
transparency                   0.00000
transparency_mode              2
transparency_picking_mode      2
10 settings matched

Example 3: grepset ^trans

transparency                   0.00000
transparency_mode              2
transparency_picking_mode      2
3 settings matched

@@ Line 1: / Line 1: @@
+{{Infobox script-repo
+|type      = script
+|filename  = grepset.py
+|author    = [[User:Zac|Ezequiel Panepucci]]
+|license   = BSD
+}}
+{{Infobox psico
+|module    = psico.helping
+}}
 Use this little script to explore PyMOL's myriad settings.
@@ Line 6: / Line 17: @@
 # put the script in a file called '''grepset.py'''
-# from within PyMOL execute '''run grepset.py'''
+# from within PyMOL execute '''run grepset.py'''. If you have the Pymol-script library configured, then '''import grepset'''
 # try it out, see examples below.
@@ Line 42: / Line 53: @@
 </pre>
-== The Script itself: grepset.py ==
+[[Category:Script_Library|Grepset]]
-<source lang="python">
+[[Category:UI_Scripts]]
-from pymol import cmd
+[[Category:Pymol-script-repo]]
-import pymol.setting
-def grepset(regexp=''):
-   '''
-DESCRIPTION
-   "grepset" greps through the list of settings using a python
-   regular expression as defined in the 're' module.
-   It returns a list of settings/values matching the regexp.
-   No regexp returns every setting.
-USAGE
-   grepset [regexp]
-EXAMPLE
-   grepset line
-   grepset ray
-SEE ALSO
-   Python re module
-   '''
-   from re import compile
-   count=0
-   regexp=compile(regexp)
-   for a in pymol.setting.get_index_list():
-      setting=pymol.setting._get_name(a)
-      if regexp.search(setting):
-         count = count + 1
-         print '%-30s %s' % (setting, cmd.get_setting_text(a,'',-1))
-   print '%d settings matched' % count
-cmd.extend('grepset',grepset)
-</source>
-''Author: Ezequiel (Zac) Panepucci''
-[[Category:Scripting_Script_Library|grepset]]

Difference between revisions of "Grepset"

Latest revision as of 06:13, 6 March 2017

Navigation menu

Search

Included in psico This command or function is available from psico, which is a PyMOL extension.
Module	psico.helping