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Difference between revisions of "Cartoon gap cutoff"
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== Example == | == Example == | ||
| − | set cartoon_gap_cutoff, | + | set cartoon_gap_cutoff, 10 |
fetch 2xwu, async=0 | fetch 2xwu, async=0 | ||
as cartoon | as cartoon | ||
orient B//152-156/ | orient B//152-156/ | ||
| + | |||
| + | [[File:cartoon_gap_cutoff.png]] | ||
| + | |||
| + | == Number of dashes == | ||
| + | |||
| + | The number of dashes is directly affected by the [[cartoon_sampling]] setting: | ||
| + | |||
| + | set cartoon_sampling, 20 | ||
== See Also == | == See Also == | ||
* [[cartoon]] dash | * [[cartoon]] dash | ||
| + | * [[cartoon_sampling]] | ||
[[Category:Settings]] | [[Category:Settings]] | ||
Latest revision as of 04:03, 8 January 2018
With cartoon_gap_cutoff > 0, if there are missing residues along the protein backbone (e.g. missing loops), PyMOL will create a dashed cartoon loop segment if the gap (in number of residues) is shorter than the cutoff.
New in PyMOL 1.8.2
Example
set cartoon_gap_cutoff, 10 fetch 2xwu, async=0 as cartoon orient B//152-156/
Number of dashes
The number of dashes is directly affected by the cartoon_sampling setting:
set cartoon_sampling, 20
See Also
- cartoon dash
- cartoon_sampling