This is a read-only mirror of pymolwiki.org
Difference between revisions of "Auto show classified"
Jump to navigation
Jump to search
m (1 revision) |
m (1 revision) |
||
| (One intermediate revision by one other user not shown) | |||
| Line 12: | Line 12: | ||
== Values == | == Values == | ||
| − | * 0: off (default) | + | * -1: for less than 500k atoms: like 1, else like 3 (default, new in PyMOL 2.0) |
| + | * 0: off (default in PyMOL 1.8) | ||
* 1: show [[Single-word_Selectors|polymer]] as [[cartoon]], [[Single-word_Selectors|organic]] as [[sticks]], and [[Single-word_Selectors|inorganic]] as [[spheres]] | * 1: show [[Single-word_Selectors|polymer]] as [[cartoon]], [[Single-word_Selectors|organic]] as [[sticks]], and [[Single-word_Selectors|inorganic]] as [[spheres]] | ||
* 2: like 1, but apply [[auto_show_lines]] and [[auto_show_nonbonded]] in addition | * 2: like 1, but apply [[auto_show_lines]] and [[auto_show_nonbonded]] in addition | ||
Latest revision as of 04:50, 11 December 2017
When loading structure files, the auto_show_classified setting sets up representations based on molecule classification (depends on auto_classify_atoms).
Available from the Tcl/Tk menu: Setting > Auto Show ... > ...
New in PyMOL 1.8.2
Example
set auto_show_classified fetch 1rx1
Values
- -1: for less than 500k atoms: like 1, else like 3 (default, new in PyMOL 2.0)
- 0: off (default in PyMOL 1.8)
- 1: show polymer as cartoon, organic as sticks, and inorganic as spheres
- 2: like 1, but apply auto_show_lines and auto_show_nonbonded in addition
- 3: simplified version, show polymer as ribbon, organic and inorganic as lines or nonbonded