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Difference between revisions of "B2transparency"
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[[b2transparency]] can set transparency settings like [[transparency]] or [[sphere_transparency]] for each atom scaled by b-factor (or any other numeric atomic property). | [[b2transparency]] can set transparency settings like [[transparency]] or [[sphere_transparency]] for each atom scaled by b-factor (or any other numeric atomic property). | ||
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| + | [[Image:b2.png|300px]] | ||
== Usage == | == Usage == | ||
Latest revision as of 01:06, 28 March 2014
| Type | Python Module |
|---|---|
| Download | b2transparency.py |
| Author(s) | Thomas Holder |
| License | BSD-2-Clause |
| This code has been put under version control in the project Pymol-script-repo | |
b2transparency can set transparency settings like transparency or sphere_transparency for each atom scaled by b-factor (or any other numeric atomic property).
Usage
b2transparency [ selection [, setting [, minimum [, maximum [, var ]]]]]
Example
# some dummy molecule with increasing b-factor along the chain
fab AAAAAAAAAAAAA
alter all, b=resv
b2transparency all
as sticks
show surface
set surface_color, gray