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Difference between revisions of "Autodock plugin"
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== Installation == | == Installation == | ||
| − | The plugin is now automatically available in the project Pymol-script-repo.<br> | + | The plugin is now automatically available in the project [http://www.pymolwiki.org/index.php/Git_intro Pymol-script-repo].<br> |
| − | It is available only with the the Vina executable, since it has been found that Vina is | + | It is available only with the the Vina executable, since it has been found that Vina is orders of magnitudes faster than Autodock4. |
| − | orders of magnitudes faster than Autodock4. | ||
| + | Or you can download it manually | ||
# Download [http://wwwuser.gwdg.de/~dseelig/adplugin.html plugin] | # Download [http://wwwuser.gwdg.de/~dseelig/adplugin.html plugin] | ||
# '''PyMOL > Plugin > Install Plugin''' | # '''PyMOL > Plugin > Install Plugin''' | ||
Revision as of 16:04, 4 December 2011
Description
This plugin should help to set up docking runs with Autodock and view docking results. It has two features:
- Setup of a docking grid for Autodock with PyMOL.
- View the docking results.
Installation
The plugin is now automatically available in the project Pymol-script-repo.
It is available only with the the Vina executable, since it has been found that Vina is orders of magnitudes faster than Autodock4.
Or you can download it manually
- Download plugin
- PyMOL > Plugin > Install Plugin
- MGLTools/AutoDockTools
- AutoDock4.2
- AutoDock Vina
Tutorial Video
Watch Dan Seeliger's autodock plugin tutorial.
Author
Python Code
| Download: plugins/autodock_plugin.py | |
| This code has been put under version control in the project Pymol-script-repo | |