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|+ style="font-size: 1.4em; font-weight: bold; text-align:left; border-bottom: 2px solid #6678b1;" | News & Updates
 
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! Official Release
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| [https://pymol.org PyMOL v2.5 has been released] on May 10, 2021.
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! Python 3
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| New [[2to3|Python 3 compatibility guide]] for scripts and plugins
 
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! POSF
 
! POSF
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! Tutorial
 
! Tutorial
 
| [[Plugins Tutorial]] updated for PyQt5
 
| [[Plugins Tutorial]] updated for PyQt5
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! Official Release
 
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| [https://pymol.org PyMOL v2.2 has been released] on July 24, 2018.
 
 
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! New Plugin
 
! New Plugin
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| [[ProBiS_H2O|ProBiS H2O]] is a new plugin for identification of conserved waters in protein structures.
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| [[PICv|PICv]] is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe
 
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! Selection keywords
 
! Selection keywords

Latest revision as of 03:21, 22 June 2021

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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v2.5 has been released on May 10, 2021.
Python 3 New Python 3 compatibility guide for scripts and plugins
POSF New PyMOL fellows announced for 2018-2019
Tutorial Plugins Tutorial updated for PyQt5
New Plugin PICv is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News See Older News.
Did you know...

SaveGroup

This script creates the command "saveGroup". saveGroup will save the specified group to disk as one file with all group objects in it, or as many files one pdb in each file. To save to one file just call 
saveGroup groupName
to save to many files call 
saveGroup groupName, oneFile=False
.

The Code

<source lang="python"> import pymol from pymol import cmd, stored


def saveGroup(g, oneFile=None): 

   """
   Save all files inside group 'g' to either
   one file or a list of files
   
   PARAMS
   g
       name of the group to save

   oneFile
       if not specified or None, saves each protein in the group
       to its own file, if oneFile=True, then saves all the files
       in the group to just one file.
       
   RETURNS
       None
   """

   oneFile = (oneFile!=None)

   if cmd.get_type(g) != "object:group":
       print "Error: please provide a group name to save."
       return

   stored.models = set()
   cmd.iterate(g, 'stored.models.add ..→
A Random PyMOL-generated Cover. See Covers.


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