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  • This script will align and color the paired secondary structures of the two proteins a similar rai from pymol import cmd, util
    2 KB (243 words) - 03:06, 28 March 2014
  • cmd.intra_fit( string selection, int state ) print cmd.intra_fit(selection, state)
    2 KB (222 words) - 04:31, 26 June 2017
  • from pymol import cmd, stored cmd.alter(residueSelection+" and name "+atomName1, 'name="gzt"')
    6 KB (869 words) - 03:24, 10 December 2018
  • This is superior to using the [[Cmd turn]] command because it also rotates the light source. That way shadows w ...feature of the LEFT figure that you are trying to label. Now horizontilly align aR with aL. Now using only the L/R arrow keys move the aR label until the i
    5 KB (788 words) - 01:44, 28 March 2014
  • See also: [[fit]], [[align]]. This program when called will align the two selections, optimally, convert the proteins in the selection to rib
    26 KB (4,053 words) - 03:23, 29 April 2019
  • -d cmd execute PyMOL command |+ style="font-weight:bold; text-align:center; font-size:150%;" | PyMOL Supported File Formats
    5 KB (729 words) - 04:31, 26 June 2017
  • from pymol import cmd if cmd.count_atoms(obj1) == 0:
    10 KB (1,617 words) - 05:01, 22 June 2020
  • cmd.spectrum("b",selection=("pe-hydrofob"),quiet=0) cmd.spectrum("b",selection=("ppe-hydrofob"),quiet=0)
    41 KB (6,131 words) - 18:10, 31 October 2015