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=Overview=
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'''Split_States''' splits and orients multiple models and multimers from the biological unit file into a set of single-state molecular objects.
'''Split_States''' splits and orients multiple models and multimers from the biological unit file.
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== Syntax ==
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<source lang="python">
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split_states object [, first [, last [, prefix ]]]
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</source>
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This splits the '''object''' from '''first''' to '''last''' out to the array of objects prefixed by '''prefix'''.  The '''prefix''' option is very handy if all your states--or a subset of the states--have the same name.
  
 
==Using==
 
==Using==
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Load your molecule
 
Load your molecule
 
<source lang="python">
 
<source lang="python">
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# example usage
 
load fileName.pdb1, name
 
load fileName.pdb1, name
 
split_states name
 
split_states name
 
delete name
 
delete name
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# split all the states to objects starting with conf
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fetch 1nmr
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split_states 1nmr, prefix=conf
 
</source>
 
</source>
  
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dele 1vls
 
dele 1vls
 
</source>
 
</source>
[[Image:1vls1.png|thumb|left|1VLS as a monomer.  This is the state of 1VLS when I load the molecule (and select cartoon representation).]]
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[[Image:1vls1_dimer.png|left|thumb|1VLS as a dimer using the split_states command.]]
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<gallery>
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Image:1vls1.png|1VLS as a monomer.  This is the state of 1VLS when I load the molecule (and select cartoon representation).
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Image:1vls1_dimer.png|1VLS as a dimer using the split_states command. Notice PyMOL automatically loads and orients the new molecules.
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</gallery>
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= See Also =
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*[http://www.rcsb.org/pdb/static.do?p=education_discussion/Looking-at-Structures/bioassembly_tutorial.html PDB Tutorial Biological Units]
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[[Category:Commands|Split States]]
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[[Category:States|Split States]]

Latest revision as of 03:36, 28 March 2014

Split_States splits and orients multiple models and multimers from the biological unit file into a set of single-state molecular objects.

Syntax

split_states object [, first [, last [, prefix ]]]

This splits the object from first to last out to the array of objects prefixed by prefix. The prefix option is very handy if all your states--or a subset of the states--have the same name.

Using

To use split_states simply Load your molecule

# example usage
load fileName.pdb1, name
split_states name
delete name

# split all the states to objects starting with conf
fetch 1nmr
split_states 1nmr, prefix=conf

Example

1VLS: A dimer.

load 1vls.pdb1, 1vls
split_states 1vls
dele 1vls

See Also