This is a read-only mirror of pymolwiki.org

Difference between revisions of "Split states"

From PyMOL Wiki
Jump to navigation Jump to search
m (Small typo)
 
m (13 revisions)
 
(2 intermediate revisions by 2 users not shown)
Line 34: Line 34:
 
Image:1vls1_dimer.png|1VLS as a dimer using the split_states command.  Notice PyMOL automatically loads and orients the new molecules.
 
Image:1vls1_dimer.png|1VLS as a dimer using the split_states command.  Notice PyMOL automatically loads and orients the new molecules.
 
</gallery>
 
</gallery>
 +
 +
= See Also =
 +
*[http://www.rcsb.org/pdb/static.do?p=education_discussion/Looking-at-Structures/bioassembly_tutorial.html PDB Tutorial Biological Units]
 +
  
 
[[Category:Commands|Split States]]
 
[[Category:Commands|Split States]]
 
[[Category:States|Split States]]
 
[[Category:States|Split States]]

Latest revision as of 03:36, 28 March 2014

Split_States splits and orients multiple models and multimers from the biological unit file into a set of single-state molecular objects.

Syntax

split_states object [, first [, last [, prefix ]]]

This splits the object from first to last out to the array of objects prefixed by prefix. The prefix option is very handy if all your states--or a subset of the states--have the same name.

Using

To use split_states simply Load your molecule

# example usage
load fileName.pdb1, name
split_states name
delete name

# split all the states to objects starting with conf
fetch 1nmr
split_states 1nmr, prefix=conf

Example

1VLS: A dimer.

load 1vls.pdb1, 1vls
split_states 1vls
dele 1vls

See Also