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Rasmolify

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Revision as of 03:08, 28 March 2014 by Bell (talk | contribs) (9 revisions)
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Here it is! Long awaited, less tested;

Install

Linux
In your ~/.pymolrc set something like the following
 run ~/pymolscripts/rasmolify.py 
Finally, make a directory called ~/pymolscripts and copy the code below into a file called rasmolify.py - That should do the trick. You may also like to add a line that reads
set virtual_trackball, off
in your ~/.pymolrc
Windows
???

Usage

Think 'rasmol'

Related

TODO

  • Check if a 'selection' exists, and limit commands to that selection (map the concept of a rasmol 'selection' onto the concept of a pymol selection).
  • Implement 'scaling' units for display functions
  • Fix the mouse behaviour?
  • Add a rasmol GUI!

Code

## This is just a quick hack. For something more meaty see;
## http://arcib.dowling.edu/sbevsl/
 
## Version 0.0.00-000/1
 
 
## Turn off the virtual_trackball
cmd.set("virtual_trackball", "off")
 
 
## spacefill
def spacefill(p1=''):
    if(p1=='off'):
        cmd.hide("spheres")
    elif(p1==''):
        cmd.show("spheres")
    else:
        print("feh!")
cmd.extend("spacefill", spacefill)
 
## cartoon
def cartoon(p1=''):
    if(p1=='off'):
        cmd.hide("cartoon")
    elif(p1==''):
        cmd.show("cartoon")
    else:
        print("feh!")
cmd.extend("cartoon", cartoon)
 
## wireframe
def wireframe(p1=''):
    if(p1=='off'):
        cmd.hide("lines")
    elif(p1==''):
        cmd.show("lines")
    else:
        print("feh!")
cmd.extend("wireframe", wireframe)
 
 
## exit
def exit():
    cmd.quit()
cmd.extend("exit", exit)