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Revision as of 02:46, 3 April 2017

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Welcome to the PyMOL Wiki!
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News & Updates
Official Release PyMOL v1.8.6 has been released on March 9, 2017.
Official Release PyMOL v1.8.4 has been released on October 4, 2016.
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Ignore case chain

The ignore_case_chain setting (default: off) controls whether the chain and segi selection operators are case sensitive. The default is to be case sensitive, so "chain A" is different from "chain a".

New In PyMOL 1.8.2 (see ignore_case for previous versions)

Example

The PDB structure 3tcx has 28 chains, including "A" and "a".

PyMOL>fetch 3tcx, async=0
PyMOL>count_atoms chain A
 count_atoms: 641 atoms
PyMOL>set ignore_case_chain, on
PyMOL>count_atoms chain A
 count_atoms: 1282 atoms

See Also

A Random PyMOL-generated Cover. See Covers.