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Autodock plugin

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This plugin should help to set up docking runs with Autodock and view docking results. It has two features:

  1. Setup of a docking grid for Autodock with PyMOL.
  2. View the docking results.


The plugin is now automatically available in the project Pymol-script-repo.
It is available only with the the Vina executable, since it has been found that Vina is orders of magnitudes faster than Autodock4.

Or you can download it manually

  1. Download plugin
  2. PyMOL > Plugin > Install Plugin
  3. MGLTools/AutoDockTools
  4. AutoDock4.2
  5. AutoDock Vina

Tutorial Video

Watch Dan Seeliger's autodock plugin tutorial.


Daniel Seeliger