This is a read-only mirror of pymolwiki.org

Retain order

From PyMOL Wiki
Revision as of 23:06, 24 April 2008 by Slaw (talk | contribs)
Jump to navigation Jump to search

Overview

If set, order is preserved when exporting an imported pdb. (Must be set before import)

Syntax

set retain_order,[0,1]
set retain_order #default 1

Example

Original PDB:

ATOM      1  CH3 ACE A   1      33.160  24.100  12.400  1.00  0.00
ATOM      2 HH31 ACE A   1      32.860  24.830  11.650  1.00  0.00
ATOM      3 HH32 ACE A   1      33.800  23.390  11.880  1.00  0.00
ATOM      4 HH33 ACE A   1      32.250  23.650  12.770  1.00  0.00
ATOM      5  C   ACE A   1      33.910  24.800  13.510  1.00  0.00
ATOM      6  O   ACE A   1      33.760  24.560  14.700  1.00  0.00

Loaded and exported with retain_order set to 0

ATOM      1  C   ACE A   1      33.910  24.800  13.510  1.00  0.00           C
ATOM      2  O   ACE A   1      33.760  24.560  14.700  1.00  0.00           O
ATOM      3  CH3 ACE A   1      33.160  24.100  12.400  1.00  0.00           C
ATOM      4 HH31 ACE A   1      32.860  24.830  11.650  1.00  0.00           H
ATOM      5 HH32 ACE A   1      33.800  23.390  11.880  1.00  0.00           H
ATOM      6 HH33 ACE A   1      32.250  23.650  12.770  1.00  0.00           H

Loaded and exported with retain_order set to 1

ATOM      1  CH3 ACE A   1      33.160  24.100  12.400  1.00  0.00           C
ATOM      2 HH31 ACE A   1      32.860  24.830  11.650  1.00  0.00           H
ATOM      3 HH32 ACE A   1      33.800  23.390  11.880  1.00  0.00           H
ATOM      4 HH33 ACE A   1      32.250  23.650  12.770  1.00  0.00           H
ATOM      5  C   ACE A   1      33.910  24.800  13.510  1.00  0.00           C
ATOM      6  O   ACE A   1      33.760  24.560  14.700  1.00  0.00           O