Autodock plugin

Description

This plugin should help to set up docking runs with Autodock and view docking results. It has two features:

1. Setup of a docking grid for Autodock with PyMOL.
2. View the docking results.

Installation

you can download it manually

1. Download plugin
2. PyMOL > Plugin > Install Plugin
3. MGLTools/AutoDockTools
4. AutoDock4.2
5. AutoDock Vina

Tutorial Video

Watch Dan Seeliger's autodock plugin tutorial.

Author

Daniel Seeliger

Example

reinitialize 

fetch 3IG7, async=0
hide everything, all
create cdk2, 3IG7 and polymer
create EFP, 3IG7 and organic
delete 3IG7
show_as cartoon, cdk2
show_as sticks, EFP
util.cbay EFP