This is a read-only mirror of pymolwiki.org
Difference between revisions of "Update"
Jump to navigation
Jump to search
m |
(matchmaker argument) |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | |||
'''update''' transfers coordinates from one selection to another. | '''update''' transfers coordinates from one selection to another. | ||
| Line 9: | Line 8: | ||
cmd.update( target ,source [,target_state=0 [,source_state=0 [,matchmaker=1 [,quiet=1 [,_self=cmd ]]]]]] ) | cmd.update( target ,source [,target_state=0 [,source_state=0 [,matchmaker=1 [,quiet=1 [,_self=cmd ]]]]]] ) | ||
</source> | </source> | ||
| + | |||
| + | === ARGUMENTS === | ||
| + | |||
| + | * '''matchmaker''' = integer: how to match atom pairs {default: 1} | ||
| + | ** 0: assume that atoms are stored in the identical order | ||
| + | ** 1: match based on all atom identifiers (segi,chain,resn,resi,name,alt) | ||
| + | ** 2: match based on ID | ||
| + | ** 3: match based on rank | ||
| + | ** 4: match based on index (same as 0 ?) | ||
| + | |||
| + | ''Note that the meaning of matchmaker=0 differs in [[update]] and [[fit]] (also [[rms]], [[rms_Cur|rms_cur]], ...)!'' | ||
===EXAMPLES=== | ===EXAMPLES=== | ||
Revision as of 22:21, 5 January 2012
update transfers coordinates from one selection to another.
USAGE
update (target-selection),(source-selection)
PYMOL API
cmd.update( target ,source [,target_state=0 [,source_state=0 [,matchmaker=1 [,quiet=1 [,_self=cmd ]]]]]] )
ARGUMENTS
- matchmaker = integer: how to match atom pairs {default: 1}
- 0: assume that atoms are stored in the identical order
- 1: match based on all atom identifiers (segi,chain,resn,resi,name,alt)
- 2: match based on ID
- 3: match based on rank
- 4: match based on index (same as 0 ?)
Note that the meaning of matchmaker=0 differs in update and fit (also rms, rms_cur, ...)!
EXAMPLES
update target,(variant)
NOTES
Currently, this applies across all pairs of states. Fine control will be added later.