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Difference between revisions of "Connect mode"
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(0 vs. 3) |
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Latest revision as of 02:46, 3 April 2017
Overview
Sets how bonds are made when loading a file.
Values:
- 0 = distance-based (excluding HETATM to HETATM) and CONECT records
- 1 = CONECT records
- 2 = distance-based, ignores CONECT records
- 3 = distance-based (including HETATM to HETATM) and CONECT records
- 4 = for loading mmCIF: use the chemical components dictionary to look up bonds (in PyMOL 1.7.4, components.cif needs to be present in the current directory, later versions have a subset of the dictionary bundled with PyMOL, and look up unknown residues from a web service)
Syntax
# ignore CONECT records
set connect_mode, 2