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2014-03-28T03:49:35Z

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This script creates the command "saveGroup". [[saveGroup]] will save the specified group to disk as one file with all group objects in it, or as many files one pdb in each file. To save to one file just call <source lang="python">saveGroup groupName</source> to save to many files call <source lang="python">saveGroup groupName, oneFile=False</source>.

= The Code =
<source lang="python">
import pymol
from pymol import cmd, stored

def saveGroup(g, oneFile=None):
"""
Save all files inside group 'g' to either
one file or a list of files

PARAMS
g
name of the group to save

oneFile
if not specified or None, saves each protein in the group
to its own file, if oneFile=True, then saves all the files
in the group to just one file.

RETURNS
None
"""

oneFile = (oneFile!=None)

if cmd.get_type(g) != "object:group":
print "Error: please provide a group name to save."
return

stored.models = set()
cmd.iterate(g, 'stored.models.add(model)')

if oneFile:
cmd.save( g + ".pdb", g)
else:
for x in stored.models:
cmd.save( x + ".pdb", x)

cmd.extend("saveGroup", saveGroup)
</source>

= See Also =
[[group]] [[toGroup]]

[[Category:Script_Library]]
[[Category:ObjSel_Scripts]]

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