Rasmolify - Revision history

Bell: 9 revisions

2014-03-28T03:08:56Z

9 revisions

New page

Here it is! Long awaited, less tested;

== Install ==
; Linux : In your ~/.pymolrc set something like the following <PRE> run ~/pymolscripts/rasmolify.py </PRE> Finally, make a directory called ~/pymolscripts and copy the code below into a file called rasmolify.py - That should do the trick. You may also like to add a line that reads <PRE>set virtual_trackball, off</PRE> in your ~/.pymolrc

; Windows : ???

== Usage ==
Think 'rasmol'

== Related ==
* http://arcib.dowling.edu/sbevsl/

== TODO ==
* Check if a 'selection' exists, and limit commands to that selection (map the concept of a rasmol 'selection' onto the concept of a pymol selection).
* Implement 'scaling' units for display functions
* Fix the mouse behaviour?
* Add a rasmol GUI!

== Code ==
<source lang="python">
## This is just a quick hack. For something more meaty see;
## http://arcib.dowling.edu/sbevsl/

## Version 0.0.00-000/1

## Turn off the virtual_trackball
cmd.set("virtual_trackball", "off")

## spacefill
def spacefill(p1=''):
if(p1=='off'):
cmd.hide("spheres")
elif(p1==''):
cmd.show("spheres")
else:
print("feh!")
cmd.extend("spacefill", spacefill)

## cartoon
def cartoon(p1=''):
if(p1=='off'):
cmd.hide("cartoon")
elif(p1==''):
cmd.show("cartoon")
else:
print("feh!")
cmd.extend("cartoon", cartoon)

## wireframe
def wireframe(p1=''):
if(p1=='off'):
cmd.hide("lines")
elif(p1==''):
cmd.show("lines")
else:
print("feh!")
cmd.extend("wireframe", wireframe)

## exit
def exit():
cmd.quit()
cmd.extend("exit", exit)
</source>

[[Category:Script_Library]]
[[Category:ThirdParty_Scripts]]

Dan at 13:51, 22 February 2008

2008-02-22T13:51:14Z

Dan at 13:49, 22 February 2008

2008-02-22T13:49:37Z

Dan at 13:47, 22 February 2008

2008-02-22T13:47:48Z

Dan: categorized

2008-02-21T12:50:32Z

categorized

Dan: /* Install */

2008-02-20T13:43:02Z

Install

Dan at 13:42, 20 February 2008

2008-02-20T13:42:11Z

Dan at 13:34, 20 February 2008

2008-02-20T13:34:53Z

Dan: rasmolify your life

2008-02-20T13:24:27Z

rasmolify your life

New page

Here it is! Long awaited, less tested;

<source lang="python">
## This is just a quick hack. For something more meaty see;
## http://arcib.dowling.edu/sbevsl/

## Version 0.0.00-000/0

## TODO:

## Check if a 'current' selection exists, and perform the action on
## that selection. Make 'off' proper. Add units to the commands that
## take them.

## spacefill
def spacefill(toggle=1):
if(toggle==1):
cmd.show("spheres")
else:
cmd.hide("spheres")
cmd.extend("spacefill", spacefill)

## cartoon
def cartoon(toggle=1):
if(toggle==1):
cmd.show("cartoon")
else:
cmd.hide("cartoon")
cmd.extend("cartoon", cartoon)

## wireframe
def wireframe(toggle=1):
if(toggle==1):
cmd.show("lines")
else:
cmd.hide("lines")
cmd.extend("wireframe", wireframe)

## exit
def exit():
cmd.quit()
cmd.extend("exit", exit)

</source>

← Older revision		Revision as of 12:50, 21 February 2008
Line 53:		Line 53:

	</source>		</source>
		+
		+	[[Category:Script_Library]]

@@ Line 13: / Line 13: @@
 == TODO ==
 * Implement 'scaling' units for display functions
 * Fix the mouse behaviour?

@@ Line 8: / Line 8: @@
 == Usage ==
 Think 'rasmol'
 == Code ==

@@ Line 13: / Line 13: @@
 ## This is just a quick hack. For something more meaty see;
 ## http://arcib.dowling.edu/sbevsl/
-−
-## Version 0.0.00-000/0
+## Version 0.0.00-000/1
-−
-## TODO:
+## Turn off the virtual_trackball
-## Check if a 'current' selection exists, and perform the action on
+cmd.set("virtual_trackball", "off")
-## that selection. Make 'off' proper. Add units to the commands that
-## take them. Turn off the virtual_trackball. Fix the mouse behaviour.
 ## spacefill
-def spacefill(toggle=1):
+def spacefill(p1=''):
-     if(toggle==1):
+     if(p1=='off'):
          cmd.show("spheres")
      else:
-         cmd.hide("spheres")
+         print("feh!")
 cmd.extend("spacefill", spacefill)
-−
 ## cartoon
-def cartoon(toggle=1):
+def cartoon(p1=''):
-     if(toggle==1):
+     if(p1=='off'):
          cmd.show("cartoon")
      else:
-         cmd.hide("cartoon")
+         print("feh!")
 cmd.extend("cartoon", cartoon)
-−
 ## wireframe
-def wireframe(toggle=1):
+def wireframe(p1=''):
-     if(toggle==1):
+     if(p1=='off'):
          cmd.show("lines")
      else:
-         cmd.hide("lines")
+         print("feh!")
 cmd.extend("wireframe", wireframe)
-−
-−
 ## exit
 def exit():
      cmd.quit()
 cmd.extend("exit", exit)
 </source>
 [[Category:Script_Library]]

@@ Line 3: / Line 3: @@
 == Install ==
 ; Linux : In your ~/.pymolrc set something like the following <PRE> run ~/pymolscripts/rasmolify.py </PRE> Finally, make a directory called ~/pymolscripts and copy the code below into a file called rasmolify.py - That should do the trick. You may also like to add a line that reads <PRE>set virtual_trackball, off</PRE> in your ~/.pymolrc
 == Usage ==

@@ Line 1: / Line 1: @@
 Here it is! Long awaited, less tested;
 <source lang="python">
 ## This is just a quick hack. For something more meaty see;