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2014-03-28T02:16:31Z

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Slaw at 20:41, 8 February 2012

2012-02-08T20:41:01Z

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'''mdo''' sets up a command to be executed upon entry into the specified frame of the movie. These commands are usually created by a PyMOL utility program (such as util.mrock). Command can actually contain several commands separated by semicolons ';'

===USAGE===
mdo frame : command

===PYMOL API===
<source lang="python">
cmd.mdo( int frame, string command )
</source>

===EXAMPLE===
// Creates a single frame movie involving a rotation about X and Y
load test.pdb
mset 1
mdo 1: turn x,5; turn y,5;
mplay

<source lang="python">
//Show waters within 4 Angstroms around the first residue from a 15 frame simulation trajectory
load structure.pdb
load_traj structure.dcd, structure, start=1, stop=15
mset 1 -15
for a in range(1,16): cmd.mdo(a,"hide sphere; select waters, (structure & i. 1 around 4) & resn HOH, state="+str(a)+"; show sphere, waters")
</source>

===NOTES===
The '''mset''' command must first be used to define the movie before "mdo" statements will have any effect. Redefinition of the movie clears any existing mdo statements.

===SEE ALSO===
[[Mset]], [[Mplay]], [[Mstop]]

[[Category:Commands|Mdo]]

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Slaw at 20:41, 8 February 2012