Jump - Revision history

Bell: 8 revisions

2014-03-28T03:06:31Z

8 revisions

2014-03-28T02:16:16Z

1 revision

2013-03-19T13:55:53Z

2010-05-25T15:36:40Z

2010-05-25T04:18:35Z

2010-05-25T04:16:06Z

2010-05-25T04:15:30Z

2010-05-25T04:14:21Z

2010-05-25T04:14:06Z

2010-05-25T04:13:45Z

@@ Line 1: / Line 1: @@
 ===Description===
@@ Line 44: / Line 51: @@
      """
-     Author Sean Law
+     Author Sean M. Law
-     Michigan State University
+     University of Michigan
-     slaw_(at)_msu_dot_edu
+     seanlaw_(at)_umich_dot_edu
      """

@@ Line 1: / Line 1: @@
 ===Description===
-In the case of movies or simulation trajectories, it is often useful to quickly jump between different frames but not necessarily in any order.  This script allows the user to specify a list of frames and flipping through the set of frames is controlled by a user-defined keystroke (limited to those available through the [[Set Key]] command).
+In the case of movies or simulation trajectories, it is often useful to quickly jump between different frames but not necessarily in any order.  This script allows the user to specify a list of frames and flipping through the set of frames is controlled by a user-defined keystroke (limited to those available through the [[Set Key]] command).  This script is a nice tool for identifying different protein states from a simulation and can be used in conjunction with the [[Modevectors]] script in a very useful way by first characterizing the directionality of the movements (using [[Modevectors]]) and then visualizing the change directly using this script.
 Note: This script also requires the [[Check Key]] script!

@@ Line 83: / Line 83: @@
      args=list(args)
-     for j in range (len(args)):
+     for i in range (x):
-        cmd.frame(int(args[j]))
+        for j in range (len(args)):
-        cmd.refresh()
+            cmd.frame(int(args[j]))
-        time.sleep(sleep)
+            cmd.refresh()
      return

@@ Line 43: / Line 43: @@
 def jump (*args, **kwargs):
-     #Author Sean Law
+     """
-     #Michigan State University
+    Author Sean Law
-     #slaw_(at)_msu_dot_edu
+     Michigan State University
      keystroke='pgdn'

← Older revision	Revision as of 03:06, 28 March 2014
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← Older revision	Revision as of 02:16, 28 March 2014
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@@ Line 11: / Line 11: @@
 <source lang="python">
-jump [frame1 [,...frameN [,sleep=0.1,[key='pgdn']]]]
+jump [frame1 [,...frameN [,sleep=0.1 [,x=1 [,key='pgdn']]]]]
 </source>
@@ Line 28: / Line 28: @@
 #This does the same thing as the first example except that the pause between frames is 10x faster
 #One could consider the "sleep" option to be similar to the frame rate
 </source>
@@ Line 92: / Line 97: @@
 [[Category:Script_Library]]