Get colors - Revision history

Bell: 3 revisions

2014-11-26T15:24:26Z

3 revisions

Sbliven: Fixing capitalization

2014-11-24T09:23:33Z

Fixing capitalization

Andwar: added category

2014-06-10T12:46:54Z

added category

Andwar: created get_colors page

2014-06-10T12:35:05Z

created get_colors page

New page

{{Infobox script-repo
|type = Python Module
|filename = get_colors.py
|author = [[User:Andwar|Andreas Warnecke]]
|license = BSD-2-Clause
}}

* '''get_colors''' contains two functions that can be useful when working with colors
** ''get_colors'' : returns all available PyMOL colors
** ''get_random_color'' : returns a random available PyMOL color

* Note that basic colors can be accessed manually without this script from the PyMOL menu under '''Setting''' --> '''Colors...'''
* For instruction on setting up plugin import see [[Git intro]] or [[Plugin manager]]

[[Image:1LSD_random_colors.png|right|300px|1LSD colored randomly by residue]]

==Usage==
get_colors [ selection [, quiet ]]
get_random_color [ selection [, quiet ]]

==Examples==
{|-
||
<source lang="python">
# basic example
get_colors # basic colors
get colors all # larger range with intermediates
</source>

<source lang="python">
#get disco funky
import get_colors
from get_colors import get_colors
from get_colors import get_random_color

cmd.delete('all')
cmd.fetch('1LSD', async=0) # :P
cmd.hide('everything')
cmd.show_as('sticks','not hetatm')
cmd.orient()

python # start a python block
from pymol import stored
stored.atom_list=[]
cmd.iterate('name CA','stored.atom_list.append([model, resi])')
resi_list=["model %s and resi %s"%(value[0],value[1]) for value in stored.atom_list]
for resi in resi_list: cmd.color(get_random_color(),resi)
python end # end python block
cmd.ray()
</source>
||
|}

==SEE ALSO==
* [[Color]]
* [[Get Color Indices]]

← Older revision		Revision as of 12:46, 10 June 2014
Line 57:		Line 57:
	* [[Color]]		* [[Color]]
	* [[Get Color Indices]]		* [[Get Color Indices]]
		+
		+	[[Category:Script_Library]]
		+	[[Category:UI_Scripts]]

← Older revision	Revision as of 15:24, 26 November 2014
(No difference)

@@ Line 11: / Line 11: @@
 * Note that basic colors can be accessed manually without this script from the PyMOL menu under '''Setting''' --> '''Colors...'''
-* For instruction on setting up plugin import see [[Git intro]] or [[Plugin manager]]
+* For instruction on setting up plugin import see [[Git intro]] or [[Plugin Manager]]
 [[Image:1LSD_random_colors.png|right|300px|1LSD colored randomly by residue]]