https://wiki.pymol.org/index.php?action=history&feed=atom&title=Get_Coordinates_II 2026-04-19T15:28:59Z Revision history for this page on the wiki MediaWiki 1.35.1 https://wiki.pymol.org/index.php?title=Get_Coordinates_II&diff=5968&oldid=prev 2014-03-28T01:46:55Z

<p>3 revisions</p> <p><b>New page</b></p><div>&lt;source lang=&quot;python&quot;&gt;<br /> from pymol import cmd<br /> from pymol import stored<br /> <br /> stored.xyz = []<br /> cmd.iterate_state(1,&quot;pept&quot;,&quot;stored.xyz.append([x,y,z])&quot;)<br /> <br /> # at this point, stored.xyz is a native Python array holding<br /> # the coordinates, which you can modify as required<br /> <br /> stored.xyz = map(lambda v:[-v[1],v[0],v[2]],stored.xyz)<br /> <br /> # and now you can update the internal coordinate sets<br /> <br /> cmd.alter_state(1,&quot;pept&quot;,&quot;(x,y,z)=stored.xyz.pop(0)&quot;)<br /> &lt;/source&gt;<br /> <br /> [[Category:Script_Library|Get Coordinates II]]<br /> [[Category:ObjSel_Scripts]]</div>

Pyadmin https://wiki.pymol.org/index.php?title=Get_Coordinates_II&diff=5965&oldid=prev 2005-02-23T15:16:21Z

<p></p> <p><b>New page</b></p><div>&lt;source lang=&quot;python&quot;&gt;<br /> from pymol import cmd<br /> from pymol import stored<br /> <br /> stored.xyz = []<br /> cmd.iterate_state(1,&quot;pept&quot;,&quot;stored.xyz.append([x,y,z])&quot;)<br /> <br /> # at this point, stored.xyz is a native Python array holding<br /> # the coordinates, which you can modify as required<br /> <br /> stored.xyz = map(lambda v:[-v[1],v[0],v[2]],stored.xyz)<br /> <br /> # and now you can update the internal coordinate sets<br /> <br /> cmd.alter_state(1,&quot;pept&quot;,&quot;(x,y,z)=stored.xyz.pop(0)&quot;)<br /> &lt;/source&gt;<br /> <br /> [[Category:Scripting_Script_Library|Get Coordinates II]]</div>

Krother