Extra fit - Revision history

Cchem: 1 revision

2019-04-29T03:23:31Z

1 revision

2019-04-18T12:08:13Z

remove psico box

2018-08-20T02:21:33Z

1 revision

2018-08-13T11:27:48Z

remove import

2015-07-09T21:08:14Z

1 revision

2015-04-30T16:08:47Z

1.7.2

2014-03-28T01:46:41Z

4 revisions

2012-07-31T07:51:58Z

Infobox psico

2012-01-15T15:03:28Z

2012-01-15T14:38:29Z

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-{{Infobox script-repo
+[[extra_fit]] aligns multiple objects to a reference object.
-{{Infobox psico
+''New in PyMOL 1.7.2''
-'''extra_fit''' aligns multiple objects to a reference object. It can use any of PyMOL's pairwise alignment methods ([[align]], [[super]], [[cealign]], [[fit]]...). More precisely it can use any function which takes arguments '''mobile''' and '''target''', so it will for example also work with [[tmalign]]. Additional keyword arguments are passed to the used method, so you can for example adjust outlier cutoff or create an alignment object.
+It can use any of PyMOL's pairwise alignment methods ([[align]], [[super]], [[cealign]], [[fit]]...). More precisely it can use any function which takes arguments '''mobile''' and '''target''', so it will for example also work with [[tmalign]]. Additional keyword arguments are passed to the used method, so you can for example adjust outlier cutoff or create an alignment object.
 There are several similar commands/scripts for this job, like "A > align > all to this" from the PyMOL panel, the "[[alignto]]" command, [http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ align_all.py and super_all.py] scripts from Robert Campbell.
 == Usage ==

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 <syntaxhighlight lang="python">
 fetch 1e4y 1ake 4ake 3hpq, async=0
 remove not chain A

← Older revision		Revision as of 16:08, 30 April 2015
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	There are several similar commands/scripts for this job, like "A > align > all to this" from the PyMOL panel, the "[[alignto]]" command, [http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ align_all.py and super_all.py] scripts from Robert Campbell.		There are several similar commands/scripts for this job, like "A > align > all to this" from the PyMOL panel, the "[[alignto]]" command, [http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ align_all.py and super_all.py] scripts from Robert Campbell.
		+
		+	''This command has been integrated in PyMOL 1.7.2''

	== Usage ==		== Usage ==

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 |author    = [[User:Speleo3|Thomas Holder]]
 |license   = BSD-2-Clause
 }}

← Older revision		Revision as of 15:03, 15 January 2012
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	[[Category:Script Library]]		[[Category:Script Library]]
	[[Category:Structure Alignment]]		[[Category:Structure Alignment]]
		+	[[Category:Pymol-script-repo]]

← Older revision	Revision as of 03:23, 29 April 2019
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← Older revision	Revision as of 02:21, 20 August 2018
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← Older revision	Revision as of 21:08, 9 July 2015
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← Older revision	Revision as of 01:46, 28 March 2014
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 == See Also ==
 * [http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ align_all.py and super_all.py]
 [[Category:Script Library]]
 [[Category:Structure Alignment]]