DSSP Stride - Revision history

Cchem: 1 revision

2017-11-13T03:27:10Z

1 revision

Speleo3: See Also

2017-10-18T07:06:37Z

Pyadmin: 6 revisions

2014-03-28T01:21:18Z

6 revisions

Hongbo zhu at 08:34, 27 January 2014

2014-01-27T08:34:51Z

Hongbo zhu at 08:33, 27 January 2014

2014-01-27T08:33:59Z

Hongbo zhu: /* Introduction */ add news about the update of the plugin

2012-10-23T07:18:22Z

Introduction: add news about the update of the plugin

Hongbo zhu: /* Introduction */

2012-04-19T16:10:37Z

Introduction

Hongbo zhu: /* Introduction */

2012-04-19T13:36:06Z

Introduction

Hongbo zhu: Created page with "= Introduction = {{Infobox script-repo |type = plugin |filename = plugins/dssp_stride.py |author = Hongbo Zhu |license = - }} [http://swift.cmbi.r..."

2012-04-12T08:48:01Z

Created page with "= Introduction = {{Infobox script-repo |type = plugin |filename = plugins/dssp_stride.py |author = Hongbo Zhu |license = - }} [http://swift.cmbi.r..."

New page

= Introduction =
{{Infobox script-repo
|type = plugin
|filename = plugins/dssp_stride.py
|author = [[User:Hongbo_zhu|Hongbo Zhu]]
|license = -
}}

[http://swift.cmbi.ru.nl/gv/dssp/ DSSP] and [http://webclu.bio.wzw.tum.de/stride/ Stride] are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py this link].

= External links =
[[File:demo_DSSP_plugin_1pyg.png|400px|thumb|right|Demonstration of DSSP plugin (pdb:1pyg).]]
* Most recent code on github: [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py DSSP & Stride Plugin for PyMOL @ GitHub]

* Original site (not updated anymore): [http://www.biotec.tu-dresden.de/~hongboz/dssp_pymol/dssp_pymol.html DSSP & Stride Plugin for PyMOL]

[[Category:Plugins]]
[[Category:Pymol-script-repo]]

@@ Line 10: / Line 10: @@
 = News =
-_01_24_Update: The plugin is able to cope with empty chain name now.
+* 2014_01_24_Update: The plugin is able to cope with empty chain name now.
 _10_22_Update: The most recent version of DSSP (v2.0.4) does not consider residues after the first [http://www.wwpdb.org/documentation/format33/sect9.html#TER <tt>TER</tt> record] from the same chain. The plugin has been updated to cope with this new feature.
 = External links =

@@ Line 10: / Line 10: @@
 = News =
-_10_22: The most recent version of DSSP (v2.0.4) does not consider residues after the first [http://www.wwpdb.org/documentation/format33/sect9.html#TER <tt>TER</tt> record] from the same chain. The plugin has been updated to cope with this new feature.
+_01_24_Update: The plugin is able to cope with empty chain name now.
 = External links =

← Older revision		Revision as of 07:18, 23 October 2012
Line 8:		Line 8:

	[http://swift.cmbi.ru.nl/gv/dssp/ DSSP] and [http://webclu.bio.wzw.tum.de/stride/ Stride] are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py this link].		[http://swift.cmbi.ru.nl/gv/dssp/ DSSP] and [http://webclu.bio.wzw.tum.de/stride/ Stride] are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py this link].
		+
		+	= News =
		+	2012_10_22: The most recent version of DSSP (v2.0.4) does not consider residues after the first [http://www.wwpdb.org/documentation/format33/sect9.html#TER <tt>TER</tt> record] from the same chain. The plugin has been updated to cope with this new feature.

	= External links =		= External links =

← Older revision	Revision as of 03:27, 13 November 2017
(No difference)

@@ Line 1: / Line 1: @@
 {{Infobox script-repo
 |type      = plugin
@@ Line 9: / Line 8: @@
 [http://swift.cmbi.ru.nl/gv/dssp/ DSSP] and [http://webclu.bio.wzw.tum.de/stride/ Stride] are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py this link].
-= News =
+== News ==
 * 2014_01_24_Update: The plugin is able to cope with empty chain name now.
 * 2012_10_22_Update: The most recent version of DSSP (v2.0.4) does not consider residues after the first [http://www.wwpdb.org/documentation/format33/sect9.html#TER <tt>TER</tt> record] from the same chain. The plugin has been updated to cope with this new feature.
-= External links =
+== External links ==
 [[File:demo_DSSP_plugin_1pyg.png|400px|thumb|right|Demonstration of DSSP plugin (pdb:1pyg).]]
 * Most recent code on github: [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py DSSP & Stride Plugin for PyMOL @ GitHub]
 * Original site (not updated anymore): [http://www.biotec.tu-dresden.de/~hongboz/dssp_pymol/dssp_pymol.html DSSP & Stride Plugin for PyMOL]
 [[Category:Plugins]]
 [[Category:Pymol-script-repo]]

← Older revision	Revision as of 01:21, 28 March 2014
(No difference)

@@ Line 2: / Line 2: @@
 {{Infobox script-repo
 |type      = plugin
-|filename  = plugins/dssp_stride.py (NOT up-to-date! See link in External Link)
+|filename  = plugins/dssp_stride.py
 |author    = [[User:Hongbo_zhu|Hongbo Zhu]]
 |license   = -