3d pdf - Revision history

Bell: 1 revision

2015-07-09T21:08:06Z

1 revision

2015-05-14T16:17:14Z

Linux install - Convert the IDTF to U3D

2014-03-28T01:48:50Z

12 revisions

2013-03-04T22:03:54Z

2013-03-04T13:07:47Z

Linux install - Convert the IDTF to U3D

2013-03-04T13:04:24Z

Linux install - Convert the IDTF to U3D

2013-03-04T13:03:49Z

Linux install

2013-03-04T13:03:29Z

Windows - Convert the IDTF to U3D

2013-03-04T13:02:48Z

Caveats

2013-03-04T11:51:03Z

LaTeX code

@@ Line 58: / Line 58: @@
 * Currently you have to compile the u3d converter on Linux. I did that with:
 * Some versions of Acrobat on Linux incorrectly parse the 3D data. Adobe knows about this and plans to fix it. Ironically, I created a 3D PDF on Linux but could only view it on Mac OS X.
 <source lang="bash">

@@ Line 177: / Line 177: @@
 = More on 3D PDFs =
 * [http://www.adobe.com/manufacturing/3dpdfsamples/3dsolutions/ 3D PDFs at Adobe]
 * [http://molecularmodelingbasics.blogspot.dk/2009/12/future-of-scientific-publishing-is-here.html Future of scientific publishing]
 == See Also ==

@@ Line 73: / Line 73: @@
 set FOLD=\$PWD
 set IN=\$PWD/\$1
 cp -f \$IN $IDDIR
 cd $IDDIR

@@ Line 74: / Line 74: @@
 set IN=\$PWD/\$1
 set OUT=\$PWD/\$1:r:t.u3d
 cp -f \$IN $IDDIR
 cd $IDDIR

@@ Line 55: / Line 55: @@
 Copy the pymol.u3d into your LaTeX folder
-= Linux install =
+= Linux install - Convert the IDTF to U3D=
 * Currently you have to compile the u3d converter on Linux. I did that with:
 * Some versions of Acrobat on Linux incorrectly parse the 3D data. Adobe knows about this and plans to fix it. Ironically, I created a 3D PDF on Linux but could only view it on Mac OS X.

← Older revision	Revision as of 21:08, 9 July 2015
(No difference)

← Older revision	Revision as of 01:48, 28 March 2014
(No difference)

@@ Line 18: / Line 18: @@
 copy this line into the pymol.tex file overwriting the same line in the file.
-== Windows - Convert the IDTF to U3D ==
+= Windows - Convert the IDTF to U3D =
-=== Quick ===
+== Quick ==
 # Download '''Universal 3D Sample Software - u3d converter - IDTF to U3D''', and extract to Desktop<br>
 # Navigate to the '''bin''' folder: \Desktop\U3D_A_061228_5\Bin\Win32\Release <br>
@@ Line 27: / Line 27: @@
   IDTFConverter -input pymol.idtf -output pymol.u3d
 Copy the pymol.u3d into your LaTeX folder
-=== General ===
+== General ==
 # Download '''Universal 3D Sample Software - u3d converter - IDTF to U3D''', and extract to C:\Program Files (x86)\U3D_A_061228_5<br>
 # Make a '''IDTF2U3D.bat''' and afterwards copy to '''C:\Windows'''.

@@ Line 55: / Line 55: @@
 Copy the pymol.u3d into your LaTeX folder
-= Caveats =
+= Linux install =
 * Currently you have to compile the u3d converter on Linux. I did that with:
 * Some versions of Acrobat on Linux incorrectly parse the 3D data. Adobe knows about this and plans to fix it. Ironically, I created a 3D PDF on Linux but could only view it on Mac OS X.
-== Linux install ==
+<source lang="bash">
-(This section is not working. How to build this ???)<br>
+cd ~/Downloads/ ;
- sudo yum install perl-XML-Parser perl-XML-Simple
+wget http://www2.iaas.msu.ru/tmp/u3d/u3d-1.4.3.tar.gz ;
-[http://sourceforge.net/projects/u3d/files/Universal%203D%20Sample%20Software/Gold%20Update%201.2/ Download zip]
+cat > IDTF2U3D << EOF
- unzip U3D_A_061228_5.zip;
+#!/bin/tcsh
- cd ~/Downloads/U3D_A_061228_5/Source;
+set FOLD=\$PWD
- setenv U3D_SOURCE $PWD/;
+set IN=\$PWD/\$1
- #Comment win, uncomment Linus lines
+set OUT=\$PWD/\$1:r:t.u3d
- nano $U3D_SOURCE/Config/u3d.conf;
+echo \$FOLD
- setenv U3D_LIBDIR {$U3D_SOURCE}Build/U3D;
+chmod +x IDTF2U3D
- ### ERROR???? ###
+ln -s $PWD/IDTF2U3D ~/bin/IDTF2U3D
- Building Core
+</source>
-  alias IDTFConverter $PWD/??
+Then write in terminal
 = LaTeX code =

@@ Line 105: / Line 105: @@
   alias IDTFConverter $PWD/??
-== LaTeX code ==
+= LaTeX code =
 Example [[:File:Pymol.pdf|3D PDF]]<br>
 Download Example, and open in acrobat reader: [http://www.fys.ku.dk/~tlinnet/1zqa.pdf 1zqa PDF]